Gene EcDH1_3208 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcDH1_3208 
Symbol 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli DH1 
KingdomBacteria 
Replicon accessionCP001637 
Strand
Start bp3450045 
End bp3451364 
Gene Length1320 bp 
Protein Length439 aa 
Translation table11 
GC content56% 
IMG OID 
Productbranched-chain amino acid transport system II carrier protein 
Protein accessionACX40834 
Protein GI260450412 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCCATC AATTAAGATC GCGCGATATC ATCGCTCTGG GCTTTATGAC ATTTGCGTTG 
TTCGTCGGCG CAGGTAACAT TATTTTCCCT CCAATGGTCG GCTTACAGGC AGGCGAACAC
GTCTGGACTG CGGCATTCGG CTTCCTCATT ACTGCCGTTG GCCTGCCGGT ATTAACGGTA
GTGGCGCTGG CAAAAGTTGG CGGCGGTGTT GACAGCCTCA GCACGCCAAT CGGTAAAGTC
GCTGGCGTAC TGCTGGCAAC GGTTTGTTAC CTGGCGGTGG GGCCGCTTTT CGCTACGCCG
CGTACAGCTA CCGTTTCCTT TGAAGTGGGG ATTGCGCCGC TGACGGGTGA TTCCGCGCTG
CCGCTGTTTA TCTACAGCCT GGTCTATTTC GCTATCGTTA TTCTGGTTTC GCTCTATCCG
GGCAAGCTGC TGGATACCGT GGGCAACTTC CTTGCGCCGC TGAAAATTAT CGCGCTGGTC
ATCCTGTCTG TTGCCGCTAT TGTCTGGCCG GCGGGTTCTA TCAGCACGGC GACTGAGGCT
TATCAAAACG CTGCGTTTTC TAACGGCTTC GTTAACGGCT ATCTGACCAT GGATACGCTG
GGCGCAATGG TGTTTGGTAT CGTTATTGTT AACGCGGCGC GTTCTCGTGG CGTTACCGAA
GCGCGTCTGC TGACCCGTTA TACCGTCTGG GCTGGCCTGA TGGCGGGTGT TGGTCTGACT
CTGCTGTACC TGGCGCTGTT CCGTCTGGGG TCAGACAGCG CGTCGCTGGT CGATCAGTCT
GCAAACGGCG CTGCTATTCT GCATGCTTAC GTTCAGCACA CCTTTGGCGG CGGCGGTAGC
TTCCTGCTGG CGGCGTTAAT CTTCATCGCC TGCCTGGTAA CGGCAGTTGG CCTGACCTGT
GCTTGTGCAG AATTCTTTGC CCAGTACGTA CCGCTCTCTT ATCGTACGCT GGTGTTTATC
CTCGGCGGCT TCTCGATGGT GGTTTCTAAC CTCGGCTTAA GCCAGCTGAT CCAGATCTCC
GTACCGGTGC TGACCGCTAT TTATCCGCCG TGTATCGCAC TGGTTGTATT AAGTTTTACA
CGCTCATGGT GGCATAATTC GTCCCGCGTG ATTGCTCCGC CGATGTTTAT CAGCCTGCTT
TTTGGTATTC TCGACGGGAT CAAAGCATCT GCATTCAGCG ATATCTTACC GTCCTGGGCG
CAGCGTTTAC CGCTGGCCGA ACAAGGTCTG GCGTGGTTAA TGCCAACAGT GGTGATGGTG
GTTCTGGCCA TTATCTGGGA TCGCGCGGCA GGTCGTCAGG TGACCTCCAG CGCTCACTAA
 
Protein sequence
MTHQLRSRDI IALGFMTFAL FVGAGNIIFP PMVGLQAGEH VWTAAFGFLI TAVGLPVLTV 
VALAKVGGGV DSLSTPIGKV AGVLLATVCY LAVGPLFATP RTATVSFEVG IAPLTGDSAL
PLFIYSLVYF AIVILVSLYP GKLLDTVGNF LAPLKIIALV ILSVAAIVWP AGSISTATEA
YQNAAFSNGF VNGYLTMDTL GAMVFGIVIV NAARSRGVTE ARLLTRYTVW AGLMAGVGLT
LLYLALFRLG SDSASLVDQS ANGAAILHAY VQHTFGGGGS FLLAALIFIA CLVTAVGLTC
ACAEFFAQYV PLSYRTLVFI LGGFSMVVSN LGLSQLIQIS VPVLTAIYPP CIALVVLSFT
RSWWHNSSRV IAPPMFISLL FGILDGIKAS AFSDILPSWA QRLPLAEQGL AWLMPTVVMV
VLAIIWDRAA GRQVTSSAH