Gene EcDH1_3200 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcDH1_3200 
Symbol 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli DH1 
KingdomBacteria 
Replicon accessionCP001637 
Strand
Start bp3440479 
End bp3441450 
Gene Length972 bp 
Protein Length323 aa 
Translation table11 
GC content52% 
IMG OID 
Productprotein-export membrane protein SecF 
Protein accessionACX40826 
Protein GI260450404 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.0111096 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGCACAGG AATATACTGT TGAACAACTA AACCACGGCC GTAAAGTCTA TGACTTTATG 
CGCTGGGACT ACTGGGCTTT CGGCATCTCT GGTCTGCTGT TAATCGCTGC TATCGTTATT
ATGGGCGTGC GCGGCTTTAA CTGGGGGCTG GATTTCACCG GTGGTACGGT TATTGAAATT
ACGCTCGAAA AACCGGCTGA AATTGACGTA ATGCGTGATG CATTGCAAAA AGCCGGTTTT
GAAGAGCCGA TGCTGCAAAA CTTTGGTAGC AGCCATGACA TCATGGTCCG TATGCCGCCT
GCTGAAGGCG AAACCGGCGG TCAGGTGTTG GGCAGCCAGG TTCTGAAGGT GATTAACGAA
TCCACCAATC AGAATGCAGC AGTGAAGCGT ATTGAGTTCG TCGGTCCGAG CGTGGGGGCA
GACCTTGCGC AAACCGGTGC GATGGCGTTG ATGGCAGCGC TGCTGTCTAT CCTCGTGTAC
GTAGGTTTCC GCTTTGAGTG GCGACTGGCG GCAGGGGTGG TTATTGCGCT GGCGCACGAC
GTTATCATTA CGCTGGGTAT TTTGTCGTTA TTCCATATCG AGATTGACCT GACCATTGTG
GCATCGTTGA TGTCGGTTAT CGGTTACTCG CTTAACGACA GTATCGTGGT ATCGGACCGT
ATTCGTGAAA ACTTCCGCAA GATCCGTCGC GGTACGCCTT ACGAAATCTT TAACGTGTCC
TTGACCCAGA CGCTGCACCG TACCTTGATC ACATCCGGTA CTACCTTGAT GGTTATCCTG
ATGCTGTACC TCTTCGGTGG TCCGGTACTG GAAGGCTTCT CGCTGACCAT GCTTATCGGT
GTTTCCATCG GTACTGCATC TTCCATCTAT GTGGCATCTG CGTTGGCTCT GAAACTGGGT
ATGAAGCGCG AACACATGTT GCAGCAGAAA GTGGAAAAAG AAGGGGCGGA TCAGCCGTCA
ATTCTGCCGT AA
 
Protein sequence
MAQEYTVEQL NHGRKVYDFM RWDYWAFGIS GLLLIAAIVI MGVRGFNWGL DFTGGTVIEI 
TLEKPAEIDV MRDALQKAGF EEPMLQNFGS SHDIMVRMPP AEGETGGQVL GSQVLKVINE
STNQNAAVKR IEFVGPSVGA DLAQTGAMAL MAALLSILVY VGFRFEWRLA AGVVIALAHD
VIITLGILSL FHIEIDLTIV ASLMSVIGYS LNDSIVVSDR IRENFRKIRR GTPYEIFNVS
LTQTLHRTLI TSGTTLMVIL MLYLFGGPVL EGFSLTMLIG VSIGTASSIY VASALALKLG
MKREHMLQQK VEKEGADQPS ILP