Gene EcDH1_3186 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcDH1_3186 
Symbol 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli DH1 
KingdomBacteria 
Replicon accessionCP001637 
Strand
Start bp3427958 
End bp3429406 
Gene Length1449 bp 
Protein Length482 aa 
Translation table11 
GC content52% 
IMG OID 
Productthiamine biosynthesis/tRNA modification protein ThiI 
Protein accessionACX40812 
Protein GI260450390 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.304423 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGTTTA TCATTAAATT GTTCCCGGAA ATCACCATCA AAAGCCAATC TGTGCGCTTG 
CGCTTTATAA AAATCCTTAC CGGGAACATT CGTAACGTTT TAAAGCACTA TGATGAGACG
CTCGCTGTCG TCCGCCACTG GGATAACATC GAAGTTCGCG CAAAAGATGA AAACCAGCGT
CTGGCTATTC GCGACGCTCT GACCCGTATT CCGGGTATCC ACCATATTCT CGAAGTCGAA
GACGTGCCGT TTACCGACAT GCACGATATT TTCGAGAAAG CGTTGGTTCA GTATCGCGAT
CAGCTGGAAG GCAAAACCTT CTGCGTACGC GTGAAGCGCC GTGGCAAACA TGATTTTAGC
TCGATTGATG TGGAACGTTA CGTCGGCGGC GGTTTAAATC AGCATATTGA ATCCGCGCGC
GTGAAGCTGA CCAATCCGGA TGTGACTGTC CATCTGGAAG TGGAAGACGA TCGTCTCCTG
CTGATTAAAG GCCGCTACGA AGGTATTGGC GGTTTCCCGA TCGGCACCCA GGAAGATGTG
CTGTCGCTCA TTTCCGGTGG TTTCGACTCC GGTGTTTCCA GTTATATGTT GATGCGTCGC
GGCTGCCGCG TGCATTACTG CTTCTTTAAC CTCGGCGGCG CGGCGCATGA AATTGGCGTG
CGTCAGGTGG CGCATTATCT GTGGAACCGC TTTGGCAGCT CCCACCGCGT GCGTTTTGTC
GCTATTAATT TCGAACCGGT CGTCGGGGAA ATTCTCGAGA AAATCGACGA CGGTCAGATG
GGCGTTATCC TCAAACGTAT GATGGTGCGT GCCGCATCTA AAGTGGCTGA ACGTTACGGC
GTACAGGCGC TGGTCACCGG CGAAGCGCTC GGCCAGGTGT CCAGCCAGAC GCTGACCAAC
CTGCGCCTGA TTGATAACGT CTCCGACACG CTGATCCTGC GTCCGCTGAT CTCTTACGAC
AAAGAGCACA TCATCAACCT GGCCCGCCAG ATTGGCACCG AAGACTTTGC TCGCACGATG
CCGGAATATT GTGGTGTGAT CTCCAAAAGC CCGACGGTGA AAGCAGTTAA ATCGAAGATT
GAAGCGGAAG AAGAGAAGTT CGACTTCAGC ATTCTCGATA AAGTGGTTGA GGAAGCGAAT
AACGTTGATA TCCGCGAAAT CGCCCAGCAG ACCGAGCAGG AAGTGGTGGA AGTGGAAACC
GTCAATGGCT TCGGCCCGAA CGACGTGATC CTCGATATCC GTTCTATCGA TGAACAGGAA
GATAAGCCAC TGAAAGTCGA AGGGATTGAT GTGGTTTCTC TGCCGTTCTA TAAACTGAGC
ACCAAATTTG GCGATCTCGA CCAGAACAAA ACCTGGCTGC TGTGGTGTGA GCGCGGGGTG
ATGAGCCGTC TGCAGGCGCT CTATCTGCGC GAGCAGGGCT TTAACAATGT GAAGGTATAT
CGCCCGTAA
 
Protein sequence
MKFIIKLFPE ITIKSQSVRL RFIKILTGNI RNVLKHYDET LAVVRHWDNI EVRAKDENQR 
LAIRDALTRI PGIHHILEVE DVPFTDMHDI FEKALVQYRD QLEGKTFCVR VKRRGKHDFS
SIDVERYVGG GLNQHIESAR VKLTNPDVTV HLEVEDDRLL LIKGRYEGIG GFPIGTQEDV
LSLISGGFDS GVSSYMLMRR GCRVHYCFFN LGGAAHEIGV RQVAHYLWNR FGSSHRVRFV
AINFEPVVGE ILEKIDDGQM GVILKRMMVR AASKVAERYG VQALVTGEAL GQVSSQTLTN
LRLIDNVSDT LILRPLISYD KEHIINLARQ IGTEDFARTM PEYCGVISKS PTVKAVKSKI
EAEEEKFDFS ILDKVVEEAN NVDIREIAQQ TEQEVVEVET VNGFGPNDVI LDIRSIDEQE
DKPLKVEGID VVSLPFYKLS TKFGDLDQNK TWLLWCERGV MSRLQALYLR EQGFNNVKVY
RP