Gene EcDH1_3146 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcDH1_3146 
Symbol 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli DH1 
KingdomBacteria 
Replicon accessionCP001637 
Strand
Start bp3384547 
End bp3385194 
Gene Length648 bp 
Protein Length215 aa 
Translation table11 
GC content45% 
IMG OID 
Producttranscriptional regulator, TetR family 
Protein accessionACX40772 
Protein GI260450350 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.0376592 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCACGAA AAACCAAACA AGAAGCGCAA GAAACGCGCC AACACATCCT CGATGTGGCT 
CTACGTCTTT TCTCACAGCA GGGGGTATCA TCCACCTCGC TGGGCGAGAT TGCAAAAGCA
GCTGGCGTTA CGCGCGGTGC AATCTACTGG CATTTTAAAG ACAAGTCGGA TTTGTTCAGT
GAGATCTGGG AACTGTCAGA ATCCAATATT GGTGAACTAG AGCTTGAGTA TCAGGCAAAA
TTCCCTGGCG ATCCACTCTC AGTATTAAGA GAGATATTAA TTCATGTTCT TGAATCCACG
GTGACAGAAG AACGGCGTCG ATTATTGATG GAGATTATAT TCCACAAATG CGAATTTGTC
GGAGAAATGG CTGTTGTGCA ACAGGCACAA CGTAATCTCT GTCTGGAAAG TTATGACCGT
ATAGAACAAA CGTTAAAACA TTGTATTGAA GCGAAAATGT TGCCTGCGGA TTTAATGACG
CGTCGCGCAG CAATTATTAT GCGCGGCTAT ATTTCCGGCC TGATGGAAAA CTGGCTCTTT
GCCCCGCAAT CTTTTGATCT TAAAAAAGAA GCCCGCGATT ACGTTGCCAT CTTACTGGAG
ATGTATCTCC TGTGCCCCAC GCTTCGTAAT CCTGCCACTA ACGAATAA
 
Protein sequence
MARKTKQEAQ ETRQHILDVA LRLFSQQGVS STSLGEIAKA AGVTRGAIYW HFKDKSDLFS 
EIWELSESNI GELELEYQAK FPGDPLSVLR EILIHVLEST VTEERRRLLM EIIFHKCEFV
GEMAVVQQAQ RNLCLESYDR IEQTLKHCIE AKMLPADLMT RRAAIIMRGY ISGLMENWLF
APQSFDLKKE ARDYVAILLE MYLLCPTLRN PATNE