Gene EcDH1_3118 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcDH1_3118 
Symbol 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli DH1 
KingdomBacteria 
Replicon accessionCP001637 
Strand
Start bp3352676 
End bp3353530 
Gene Length855 bp 
Protein Length284 aa 
Translation table11 
GC content56% 
IMG OID 
ProductThioredoxin domain protein 
Protein accessionACX40744 
Protein GI260450322 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCGTAG AAAATATTGT CAACATTAAC GAATCTAACC TGCAACAGGT TCTTGAACAG 
TCGATGACCA CTCCGGTGCT GTTCTATTTT TGGTCTGAAC GTAGCCAGCA CTGTTTGCAG
TTAACCCCAA TTCTGGAAAG CCTCGCGGCG CAGTACAACG GGCAATTTAT TCTGGCGAAG
CTGGACTGCG ACGCGGAGCA GATGATTGCC GCGCAGTTTG GTCTGCGTGC GATTCCGACC
GTGTATCTGT TCCAGAACGG GCAACCGGTA GATGGCTTCC AGGGGCCGCA ACCGGAAGAG
GCGATCCGCG CCCTGCTGGA TAAAGTGCTG CCGCGCGAAG AAGAGCTGAA AGCGCAGCAG
GCGATGCAAC TGATGCAGGA AAGCAATTAC ACCGATGCCC TGCCATTGCT GAAAGACGCC
TGGCAGTTGT CGAATCAGAA CGGGGAGATC GGCCTGCTGC TGGCAGAAAC GCTGATTGCG
CTGAACCGTT CTGAAGATGC GGAAGCGGTG CTGAAAACCA TTCCGTTGCA GGATCAGGAC
ACCCGCTACC AGGGGCTGGT GGCGCAAATC GAACTGCTGA AGCAGGCGGC TGATACGCCG
GAAATTCAAC AGTTGCAACA GCAGGTGGCG GAGAATCCAG AAGATGCCGC ACTGGCGACG
CAACTGGCGC TGCAACTGCA TCAGGTTGGG CGCAATGAAG AGGCGCTGGA GTTGCTGTTC
GGGCATCTGC GTAAAGATCT CACCGCCGCA GACGGTCAGA CGCGTAAAAC GTTCCAGGAG
ATCCTCGCTG CGCTGGGTAC GGGTGATGCA CTGGCGTCGA AGTATCGCCG CCAGCTGTAT
GCATTGTTGT ATTGA
 
Protein sequence
MSVENIVNIN ESNLQQVLEQ SMTTPVLFYF WSERSQHCLQ LTPILESLAA QYNGQFILAK 
LDCDAEQMIA AQFGLRAIPT VYLFQNGQPV DGFQGPQPEE AIRALLDKVL PREEELKAQQ
AMQLMQESNY TDALPLLKDA WQLSNQNGEI GLLLAETLIA LNRSEDAEAV LKTIPLQDQD
TRYQGLVAQI ELLKQAADTP EIQQLQQQVA ENPEDAALAT QLALQLHQVG RNEEALELLF
GHLRKDLTAA DGQTRKTFQE ILAALGTGDA LASKYRRQLY ALLY