Gene EcDH1_3115 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcDH1_3115 
Symbol 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli DH1 
KingdomBacteria 
Replicon accessionCP001637 
Strand
Start bp3350536 
End bp3351222 
Gene Length687 bp 
Protein Length228 aa 
Translation table11 
GC content57% 
IMG OID 
ProductABC transporter related protein 
Protein accessionACX40741 
Protein GI260450319 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCAGCGG AAAACATTGT TGAAGTTCAT CATCTTAAGA AGTCCGTCGG TCAGGGGGAG 
CATGAACTCT CCATCCTCAC CGGAGTTGAG CTGGTTGTCA AACGTGGCGA GACCATCGCA
CTGGTGGGCG AGTCGGGATC GGGTAAGTCA ACCTTGCTGG CGATCCTCGC CGGGCTTGAT
GACGGCAGCA GTGGCGAAGT GAGTCTGGTG GGACAACCGC TACATAATAT GGACGAAGAA
GCGCGGGCAA AGTTGCGCGC GAAGCACGTC GGCTTTGTTT TTCAGTCATT TATGTTAATT
CCTACCCTTA ACGCGCTGGA AAACGTCGAG CTTCCGGCTC TGCTGCGCGG TGAGAGTAGC
GCGGAAAGTC GTAACGGGGC GAAAGCGTTG CTCGAACAGT TAGGGCTGGG TAAACGTCTG
GATCATCTTC CGGCACAGCT TTCCGGCGGT GAACAGCAAC GAGTGGCGCT GGCACGAGCC
TTTAATGGTC GACCTGATGT GCTGTTTGCC GACGAACCCA CCGGCAACCT TGACCGCCAG
ACGGGCGATA AAATTGCCGA CCTGCTGTTT TCCCTCAACC GTGAACATGG CACCACGTTG
ATTATGGTGA CCCACGACCT GCAACTGGCG GCACGCTGCG ACCGCTGCTT ACGGCTGGTG
AACGGGCAGT TGCAGGAGGA AGCATGA
 
Protein sequence
MPAENIVEVH HLKKSVGQGE HELSILTGVE LVVKRGETIA LVGESGSGKS TLLAILAGLD 
DGSSGEVSLV GQPLHNMDEE ARAKLRAKHV GFVFQSFMLI PTLNALENVE LPALLRGESS
AESRNGAKAL LEQLGLGKRL DHLPAQLSGG EQQRVALARA FNGRPDVLFA DEPTGNLDRQ
TGDKIADLLF SLNREHGTTL IMVTHDLQLA ARCDRCLRLV NGQLQEEA