Gene EcDH1_3108 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcDH1_3108 
Symbol 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli DH1 
KingdomBacteria 
Replicon accessionCP001637 
Strand
Start bp3338734 
End bp3339660 
Gene Length927 bp 
Protein Length308 aa 
Translation table11 
GC content52% 
IMG OID 
Producttranscriptional regulator, LysR family 
Protein accessionACX40734 
Protein GI260450312 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones44 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTCGATC CAGAAACCTT GCGGACTTTC ATTGCGGTTG CTGAAACAGG AAGTTTTTCA 
AAAGCGGCAG AACGATTATG TAAAACCACG GCGACGATCA GTTATCGCAT TAAACTTCTG
GAAGAGAATA CCGGAGTAGC GCTGTTTTTC CGTACGACTC GCAGCGTGAC GTTGACAGCG
GCTGGCGAGC ATCTACTTTC CCAGGCCAGA GACTGGCTGA GCTGGCTGGA AAGTATGCCA
AGCGAGCTGC AACAGGTGAA TGATGGCGTG GAACGCCAGG TGAATATTGT CATCAACAAC
CTGCTCTACA ACCCCCAGGC CGTCGCCCAG TTGCTGGCGT GGCTGAATGA GCGTTACCCC
TTTACCCAGT TTCACATCTC CCGACAAATC TATATGGGCG TCTGGGACTC GCTATTGTAC
GAAGGTTTTT CGCTGGCTAT CGGCGTCACG GGAACTGAGG CGCTGGCAAA TACCTTTAGT
CTTGATCCCT TAGGATCGGT GCAATGGCGC TTTGTCATGG CGGCGGATCA TCCGCTGGCG
AACGTTGAAG AGCCGCTAAC AGAAGCGCAG TTGCGGCGCT TTCCGGCGGT CAATATTGAA
GACAGCGCCC GCACCTTAAC CAAACGCGTC GCCTGGCGAT TGCCAGGGCA AAAAGAGATT
ATTGTTCCCG ATATGGAAAC GAAAATCGCC GCCCATCTGG CGGGCGTTGG CATTGGTTTT
TTGCCAAAAT CGCTTTGCCA GTCAATGATC GATAATCAAC AACTGGTCAG CCGGGTAATC
CCAACGATGC GCCCTCCTTC GCCATTGAGT CTGGCATGGC GCAAATTTGG CAGCGGCAAA
GCGGTAGAAG ATATTGTGAC CTTGTTTACC CAGCGCAGGC CGGAAATCAG CGGATTTTTA
GAAATTTTCG GCAACCCACG CAGTTAA
 
Protein sequence
MFDPETLRTF IAVAETGSFS KAAERLCKTT ATISYRIKLL EENTGVALFF RTTRSVTLTA 
AGEHLLSQAR DWLSWLESMP SELQQVNDGV ERQVNIVINN LLYNPQAVAQ LLAWLNERYP
FTQFHISRQI YMGVWDSLLY EGFSLAIGVT GTEALANTFS LDPLGSVQWR FVMAADHPLA
NVEEPLTEAQ LRRFPAVNIE DSARTLTKRV AWRLPGQKEI IVPDMETKIA AHLAGVGIGF
LPKSLCQSMI DNQQLVSRVI PTMRPPSPLS LAWRKFGSGK AVEDIVTLFT QRRPEISGFL
EIFGNPRS