| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcDH1_3081 |
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| Symbol | |
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| ID | 0 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli DH1 |
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| Kingdom | Bacteria |
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| Replicon accession | CP001637 |
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| Strand | - |
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| Start bp | 3308655 |
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| End bp | 3311258 |
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| Gene Length | 2604 bp |
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| Protein Length | 867 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | |
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| Product | fimbrial biogenesis outer membrane usher protein |
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| Protein accession | ACX40707 |
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| Protein GI | 260450285 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAATAC CCACTACTAC GGATATTCCG CAGAGGTATA CCTGGTGTCT GGCCGGAATT
TGTTATTCAT CTCTTGCCAT TTTACCCTCC TTTTTAAGCT ATGCGGAAAG TTATTTCAAC
CCGGCATTTT TATTAGAGAA TGGCACATCC GTTGCTGATT TATCGCGCTT TGAGAGAGGT
AATCATCAAC CTGCGGGCGT GTATCGGGTG GATCTCTGGC GTAATGATGA GTTCATTGGT
TCGCAGGATA TCGTATTTGA ATCGACAACA GAAAATACAG GTGATAAATC AGGTGGGTTA
ATGCCCTGTT TTAACCAGGT ACTTCTTGAA CGAATTGGCC TTAATAGCAG TGCATTTCCC
GAGTTAGCCC AGCAGCAAAA CAATAAATGC ATCAATTTAC TGAAAGCTGT ACCTGATGCC
ACAATTAACT TTGATTTTGC AGCGATGCGC CTGAACATCA CTATTCCTCA GATAGCGTTG
TTGAGTAGCG CTCACGGTTA CATTCCGCCT GAAGAGTGGG ATGAAGGTAT TCCTGCTTTA
CTCCTGAATT ATAATTTCAC CGGTAACAGA GGTAATGGTA ACGATAGCTA TTTTTTTAGT
GAGCTCAGCG GGATTAATAT TGGCCCGTGG CGTTTACGCA ACAATGGTTC CTGGAACTAT
TTTCGCGGAA ATGGATATCA TTCAGAACAG TGGAATAATA TTGGCACCTG GGTACAGCGC
GCCATTATTC CGCTGAAAAG TGAACTGGTA ATGGGAGACG GCAATACAGG AAGTGATATT
TTCGATGGCG TTGGATTTCG TGGTGTACGG CTTTATTCTT CTGATAATAT GTATCCTGAT
AGCCAGCAAG GGTTTGCCCC AACGGTACGT GGGATTGCCC GTACGGCGGC CCAGCTAACG
ATTCGGCAAA ATGGTTTTAT TATCTATCAA AGCTATGTTT CCCCCGGCGC TTTTGAAATT
ACAGATTTGC ACCCGACATC TTCAAATGGC GATCTGGACG TCACCATCGA CGAGCGCGAT
GGCAATCAGC AGAATTACAC AATTCCGTAT TCAACAGTGC CAATTTTACA ACGCGAAGGG
CGTTTCAAAT TTGACCTGAC GGCGGGCGAT TTTCGTAGCG GTAATAGTCA GCAATCATCG
CCTTTCTTTT TTCAGGGTAC GGCACTCGGC GGTTTACCAC AGGAATTTAC TGCCTACGGC
GGGACGCAAT TATCTGCCAA TTACACCGCC TTTTTATTAG GGCTGGGGCG CAATCTCGGG
AACTGGGGCG CAGTGTCGCT GGATGTAACG CATGCGCGCA GTCAGTTAGC CGACGCCAGT
CGTCATGAGG GGGATTCTAT TCGCTTCCTC TATGCGAAAT CGATGAACAC CTTCGGCACC
AATTTTCAGT TAATGGGTTA CCGCTATTCG ACACAAGGTT TTTATACCCT TGATGATGTT
GCGTATCGTC GAATGGAGGG GTACGAATAT GATTACGACG GTGAGCATCG CGATGAACCG
ATAATCGTGA ATTACCACAA TTTACGCTTT AGCCGTAAAG ACCGTTTGCA GTTAAATGTT
TCACAATCAC TTAATGACTT TGGCTCGCTT TATATTTCTG GTACCCATCA AAAATACTGG
AATACTTCGG ATTCAGATAC GTGGTATCAG GTGGGGTATA CCAGCAGCTG GGTTGGCATC
AGTTATTCGC TCTCATTTTC GTGGAATGAA TCTGTAGGGA TCCCCGATAA CGAACGTATT
GTCGGACTTA ATGTTTCAGT GCCTTTCAAT GTTTTGACCA AACGTCGCTA CACCCGGGAA
AATGCGCTCG ACCGCGCTTA TGCCTCCTTT AACGCCAACC GTAACAGCAA CGGGCAAAAT
AGCTGGCTGG CAGGTGTAGG TGGGACCTTA CTGGAAGGCC ACAACCTGAG TTATCACGTA
AGCCAGGGTG ATACCTCGAA TAATGGGTAC ACGGGCAGCG CCACGGCAAA CTGGCAGGCC
GCTTACGGTA CGCTGGGGGG CGGGTATAAC TACGACCGCG ATCAACATGA CGTTAACTGG
CAGCTGTCTG GCGGTGTGGT CGGGCATGAA AATGGCATAA CGCTGAGCCA GCCTTTAGGG
GATACCAATG TTTTGATTAA AGCGCCTGGC GCAGGCGGTG TACGCATTGA AAATCAAACT
GGCATTTTAA CCGACTGGCG CGGCTATGCG GTGATGCTGT ATGCCACGGT TTATCGGTAT
AACCGTATCG CGCTTGATAC CAATACGATG GGGAATTCCA TCGATGTTGA AAAAAATATT
AGCAGCGTTG TGCCGACGCA AGGCGCGTTG GTTCGTGCCA ATTTTGATAC CCGCATAGGC
GTGCGGGCGC TCATTACCGT TACCCAGGGC GGAAAACCGG TGCCGTTTGG ATCACTGGTA
CGGGAAAACA GTACCGGAAT AACCAGTATG GTGGGTGATG ACGGGCAAGT TTATTTAAGT
GGTGCGCCAT TGTCTGGTGA ATTACTGGTT CAGTGGGGAG ACGGCGCGAA CTCACGCTGC
ATTGCGCACT ATGTATTGCC GAAGCAAAGC TTACAGCAAG CCGTCACTGT TATTTCGGCA
GTTTGCACAC ATCCTGGCTC ATAA
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| Protein sequence | MKIPTTTDIP QRYTWCLAGI CYSSLAILPS FLSYAESYFN PAFLLENGTS VADLSRFERG
NHQPAGVYRV DLWRNDEFIG SQDIVFESTT ENTGDKSGGL MPCFNQVLLE RIGLNSSAFP
ELAQQQNNKC INLLKAVPDA TINFDFAAMR LNITIPQIAL LSSAHGYIPP EEWDEGIPAL
LLNYNFTGNR GNGNDSYFFS ELSGINIGPW RLRNNGSWNY FRGNGYHSEQ WNNIGTWVQR
AIIPLKSELV MGDGNTGSDI FDGVGFRGVR LYSSDNMYPD SQQGFAPTVR GIARTAAQLT
IRQNGFIIYQ SYVSPGAFEI TDLHPTSSNG DLDVTIDERD GNQQNYTIPY STVPILQREG
RFKFDLTAGD FRSGNSQQSS PFFFQGTALG GLPQEFTAYG GTQLSANYTA FLLGLGRNLG
NWGAVSLDVT HARSQLADAS RHEGDSIRFL YAKSMNTFGT NFQLMGYRYS TQGFYTLDDV
AYRRMEGYEY DYDGEHRDEP IIVNYHNLRF SRKDRLQLNV SQSLNDFGSL YISGTHQKYW
NTSDSDTWYQ VGYTSSWVGI SYSLSFSWNE SVGIPDNERI VGLNVSVPFN VLTKRRYTRE
NALDRAYASF NANRNSNGQN SWLAGVGGTL LEGHNLSYHV SQGDTSNNGY TGSATANWQA
AYGTLGGGYN YDRDQHDVNW QLSGGVVGHE NGITLSQPLG DTNVLIKAPG AGGVRIENQT
GILTDWRGYA VMLYATVYRY NRIALDTNTM GNSIDVEKNI SSVVPTQGAL VRANFDTRIG
VRALITVTQG GKPVPFGSLV RENSTGITSM VGDDGQVYLS GAPLSGELLV QWGDGANSRC
IAHYVLPKQS LQQAVTVISA VCTHPGS
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