Gene EcDH1_3078 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcDH1_3078 
Symbol 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli DH1 
KingdomBacteria 
Replicon accessionCP001637 
Strand
Start bp3306475 
End bp3307107 
Gene Length633 bp 
Protein Length210 aa 
Translation table11 
GC content37% 
IMG OID 
Producttwo component transcriptional regulator, LuxR family 
Protein accessionACX40704 
Protein GI260450282 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones43 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACCAA CGTCGGTGAT CATTATGGAT ACTCATCCTA TCATCAGAAT GTCTATTGAA 
GTTCTGTTGC AAAAAAACAG TGAATTGCAG ATTGTCCTGA AAACGGATGA TTATCGCATA
ACCATCGATT ATCTCCGAAC CCGTCCTGTT GATTTAATCA TTATGGATAT AGACTTGCCC
GGAACAGACG GTTTTACCTT CCTGAAAAGG ATCAAACAAA TCCAGAGCAC AGTGAAAGTG
TTATTTTTAT CATCGAAATC AGAATGCTTT TATGCTGGCA GAGCGATACA AGCTGGTGCT
AACGGTTTTG TCAGTAAATG CAATGATCAG AATGATATTT TTCATGCCGT TCAGATGATC
CTCTCCGGAT ACACGTTTTT TCCCAGCGAA ACGCTTAACT ATATAAAAAG CAATAAATGT
AGTACGAATA GTTCAACGGT CACTGTGCTA TCTAATCGTG AAGTGACCAT ATTACGTTAT
CTGGTTAGCG GATTATCTAA TAAAGAAATT GCCGATAAGT TATTACTTAG CAATAAAACA
GTTAGTGCGC ATAAATCTAA TATTTATGGC AAGCTAGGTT TGCATTCAAT TGTAGAGCTT
ATCGACTACG CCAAATTATA CGAATTAATA TAA
 
Protein sequence
MKPTSVIIMD THPIIRMSIE VLLQKNSELQ IVLKTDDYRI TIDYLRTRPV DLIIMDIDLP 
GTDGFTFLKR IKQIQSTVKV LFLSSKSECF YAGRAIQAGA NGFVSKCNDQ NDIFHAVQMI
LSGYTFFPSE TLNYIKSNKC STNSSTVTVL SNREVTILRY LVSGLSNKEI ADKLLLSNKT
VSAHKSNIYG KLGLHSIVEL IDYAKLYELI