Gene EcDH1_3059 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcDH1_3059 
Symbol 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli DH1 
KingdomBacteria 
Replicon accessionCP001637 
Strand
Start bp3286349 
End bp3287791 
Gene Length1443 bp 
Protein Length480 aa 
Translation table11 
GC content52% 
IMG OID 
Productheavy metal sensor signal transduction histidine kinase 
Protein accessionACX40687 
Protein GI260450265 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones47 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTCAGTA AGCCATTTCA GCGCCCGTTT TCGCTGGCAA CCCGCCTGAC CTTTTTTATC 
AGCCTGGCCA CCATCGCGGC GTTTTTCGCC TTTGCATGGA TCATGATCCA CTCAGTAAAA
GTTCATTTTG CCGAGCAGGA TATTAATGAT TTAAAAGAGA TTAGCGCCAC CCTTGAACGG
GTACTAAATC ACCCTGACGA AACGCAAGCC CGACGCTTAA TGACGCTGGA AGATATCGTC
AGTGGTTATT CCAATGTGTT GATTTCCCTG GCAGATAGTC AGGGTAAAAC GGTGTATCAC
TCCCCCGGTG CGCCGGATAT CCGCGAGTTT ACGCGTGACG CCATACCCGA TAAAGACGCT
CAGGGTGGCG AGGTGTATCT CCTTTCCGGC CCGACGATGA TGATGCCAGG CCACGGTCAC
GGGCATATGG AACACAGCAA CTGGCGGATG ATTAACTTGC CGGTTGGCCC GTTGGTGGAC
GGCAAACCGA TTTATACGCT CTACATCGCG CTTTCGATCG ATTTTCATCT TCATTACATA
AATGATTTGA TGAATAAACT TATTATGACC GCATCGGTAA TCAGCATCCT GATCGTCTTT
ATCGTACTGT TGGCGGTACA TAAAGGTCAC GCGCCGATCC GCAGCGTCAG CCGTCAAATC
CAGAATATTA CCTCGAAAGA TCTCGACGTT CGCCTCGACC CGCAGACCGT GCCCATTGAG
CTGGAACAGC TGGTACTGTC GTTCAACCAT ATGATCGAGC GTATTGAGGA TGTCTTTACC
CGCCAGTCCA ATTTCTCAGC GGATATCGCT CACGAAATTC GCACACCAAT TACGAATCTC
ATAACGCAAA CCGAAATCGC CCTCAGCCAG TCGCGCAGCC AGAAGGAGCT GGAAGATGTG
CTCTACTCTA ATCTCGAAGA GCTGACGCGA ATGGCGAAAA TGGTCAGCGA TATGCTGTTT
CTCGCTCAGG CCGATAACAA CCAGCTAATC CCCGAAAAGA AAATGCTCAA CCTGGCGGAT
GAAGTCGGCA AAGTGTTCGA TTTTTTCGAG GCGTTAGCGG AAGATCGCGG CGTGGAGTTG
CGGTTTGTTG GCGACAAGTG TCAGGTCGCG GGCGATCCGC TGATGCTGCG TCGGGCGCTA
AGCAACCTGC TTTCGAACGC CCTGCGTTAT ACGCCAACCG GAGAGACAAT TGTAGTGCGC
TGTCAGACGG TCGATCACCT GGTGCAAGTT ATCGTCGAAA ACCCCGGTAC GCCCATTGCG
CCCGAGCACT TACCGCGATT GTTTGACCGT TTCTATCGCG TTGACCCCTC CCGCCAGCGA
AAAGGTGAAG GTAGCGGTAT TGGCCTGGCG ATAGTGAAAT CGATTGTTGT CGCGCATAAA
GGCACGGTTG CGGTAACGTC GGATGCGCGG GGGACAAGGT TTGTTATCAC ATTACCCGCT
TAA
 
Protein sequence
MVSKPFQRPF SLATRLTFFI SLATIAAFFA FAWIMIHSVK VHFAEQDIND LKEISATLER 
VLNHPDETQA RRLMTLEDIV SGYSNVLISL ADSQGKTVYH SPGAPDIREF TRDAIPDKDA
QGGEVYLLSG PTMMMPGHGH GHMEHSNWRM INLPVGPLVD GKPIYTLYIA LSIDFHLHYI
NDLMNKLIMT ASVISILIVF IVLLAVHKGH APIRSVSRQI QNITSKDLDV RLDPQTVPIE
LEQLVLSFNH MIERIEDVFT RQSNFSADIA HEIRTPITNL ITQTEIALSQ SRSQKELEDV
LYSNLEELTR MAKMVSDMLF LAQADNNQLI PEKKMLNLAD EVGKVFDFFE ALAEDRGVEL
RFVGDKCQVA GDPLMLRRAL SNLLSNALRY TPTGETIVVR CQTVDHLVQV IVENPGTPIA
PEHLPRLFDR FYRVDPSRQR KGEGSGIGLA IVKSIVVAHK GTVAVTSDAR GTRFVITLPA