| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcDH1_3033 |
|---|
| Symbol | |
|---|
| ID | 0 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli DH1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | CP001637 |
|---|
| Strand | - |
|---|
| Start bp | 3255059 |
|---|
| End bp | 3256234 |
|---|
| Gene Length | 1176 bp |
|---|
| Protein Length | 391 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | |
|---|
| Product | isochorismate synthase |
|---|
| Protein accession | ACX40661 |
|---|
| Protein GI | 260450239 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 0.652174 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGATACGT CACTGGCTGA GGAAGTACAG CAGACCATGG CAACACTTGC GCCCAATCGC
TTTTTCTTTA TGTCGCCGTA CCGCAGTTTT ACGACGTCAG GATGTTTCGC CCGCTTCGAT
GAACCGGCTG TGAACGGGGA TTCGCCCGAC AGTCCCTTCC AGCAAAAACT CGCCGCGCTG
TTTGCCGATG CCAAAGCGCA GGGCATCAAA AATCCGGTGA TGGTCGGGGC GATTCCCTTC
GATCCACGTC AGCCTTCGTC GCTGTATATT CCTGAATCCT GGCAGTCGTT CTCCCGTCAG
GAAAAACAAG CTTCCGCACG CCGTTTCACC CGCAGCCAGT CGCTGAATGT GGTGGAACGC
CAGGCAATTC CGGAGCAAAC CACGTTTGAA CAGATGGTTG CCCGCGCCGC CGCACTTACC
GCCACGCCGC AGGTCGACAA AGTGGTGTTG TCACGGTTGA TTGATATCAC CACTGACGCC
GCCATTGATA GTGGCGTATT GCTGGAACGG TTGATTGCGC AAAACCCGGT TAGTTACAAC
TTCCATGTTC CGCTGGCTGA TGGTGGCGTC CTGCTGGGGG CCAGCCCGGA ACTGCTGCTA
CGTAAAGACG GCGAGCGTTT TAGCTCCATT CCGTTAGCCG GTTCCGCGCG TCGTCAGCCG
GATGAAGTGC TCGATCGCGA AGCAGGTAAT CGTCTGCTGG CGTCAGAAAA AGATCGCCAT
GAACATGAAC TGGTGACTCA GGCGATGAAA GAGGTACTGC GCGAACGCAG TAGTGAGTTA
CACGTTCCTT CTTCTCCACA GCTGATCACC ACGCCGACGC TGTGGCATCT CGCAACTCCC
TTTGAAGGTA AAGCGAATTC GCAAGAAAAC GCACTGACTC TGGCCTGTCT GCTGCATCCG
ACCCCCGCGC TGAGCGGTTT CCCGCATCAG GCCGCGACCC AGGTTATTGC TGAACTGGAA
CCGTTCGACC GCGAACTGTT TGGCGGCATT GTGGGTTGGT GTGACAGCGA AGGTAACGGC
GAATGGGTGG TGACCATCCG CTGCGCGAAG CTGCGGGAAA ATCAGGTGCG TCTGTTTGCC
GGAGCGGGGA TTGTGCCTGC GTCGTCACCG TTGGGTGAGT GGCGCGAAAC AGGCGTCAAA
CTTTCTACCA TGTTGAACGT TTTTGGATTG CATTAA
|
|---|
| Protein sequence | MDTSLAEEVQ QTMATLAPNR FFFMSPYRSF TTSGCFARFD EPAVNGDSPD SPFQQKLAAL
FADAKAQGIK NPVMVGAIPF DPRQPSSLYI PESWQSFSRQ EKQASARRFT RSQSLNVVER
QAIPEQTTFE QMVARAAALT ATPQVDKVVL SRLIDITTDA AIDSGVLLER LIAQNPVSYN
FHVPLADGGV LLGASPELLL RKDGERFSSI PLAGSARRQP DEVLDREAGN RLLASEKDRH
EHELVTQAMK EVLRERSSEL HVPSSPQLIT TPTLWHLATP FEGKANSQEN ALTLACLLHP
TPALSGFPHQ AATQVIAELE PFDRELFGGI VGWCDSEGNG EWVVTIRCAK LRENQVRLFA
GAGIVPASSP LGEWRETGVK LSTMLNVFGL H
|
|---|
| |