Gene EcDH1_2927 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcDH1_2927 
Symbol 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli DH1 
KingdomBacteria 
Replicon accessionCP001637 
Strand
Start bp3138563 
End bp3140044 
Gene Length1482 bp 
Protein Length493 aa 
Translation table11 
GC content52% 
IMG OID 
Productamino acid/peptide transporter 
Protein accessionACX40560 
Protein GI260450138 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATAAAC ACGCATCACA GCCGCGCGCT ATTTACTATG TCGTTGCGCT GCAAATCTGG 
GAATATTTTA GCTTTTACGG CATGCGTGCC CTGCTGATTC TCTATCTCAC CAATCAACTA
AAATACAACG ATACTCACGC CTACGAGTTA TTTAGCGCCT ACTGTTCGCT GGTGTATGTC
ACGCCAATCC TCGGTGGCTT TTTGGCGGAT AAAGTTCTCG GCAATCGCAT GGCGGTGATG
CTGGGGGCGT TGTTGATGGC GATCGGTCAT GTGGTGCTGG GTGCCAGTGA GATCCATCCG
TCATTCCTCT ATCTGTCCCT GGCGATTATC GTCTGCGGCT ATGGCCTGTT TAAATCTAAC
GTAAGCTGTC TGCTCGGCGA GCTGTATGAG CCAACCGATC CGCGTCGTGA TGGCGGTTTC
TCGCTGATGT ATGCGGCGGG TAACGTGGGG TCTATTATCG CACCTATCGC CTGTGGTTAC
GCCCAGGAAG AGTACAGCTG GGCGATGGGC TTTGGCCTGG CGGCGGTTGG CATGATCGCG
GGTCTGGTCA TTTTCTTATG TGGCAATCGT CATTTCACTC ATACCCGCGG CGTTAACAAA
AAAGTACTGC GTGCGACAAA CTTTCTCCTG CCGAACTGGG GATGGCTGCT GGTTCTGCTG
GTGGCAACGC CTGCACTGAT TACCATACTG TTCTGGAAAG AGTGGTCGGT ATACGCCTTA
ATTGTCGCGA CTATTATTGG CCTGGGTGTA CTGGCAAAAA TTTATCGCAA AGCAGAAAAC
CAGAAACAGC GGAAGGAGCT GGGGCTGATT GTGACGCTCA CCTTCTTCAG TATGTTGTTC
TGGGCCTTCG CACAACAGGG CGGTAGCTCG ATTAGCCTTT ATATCGACCG CTTCGTTAAC
CGCGATATGT TTGGTTATAC CGTTCCGACC GCGATGTTCC AGTCGATTAA TGCCTTCGCA
GTTATGCTGT GCGGTGTGTT CCTGGCGTGG GTGGTAAAAG AGAGTGTCGC GGGTAATCGT
ACCGTGCGCA TCTGGGGGAA ATTTGCTCTT GGCCTTGGCC TGATGAGCGC CGGATTCTGC
ATTCTGACCT TAAGCGCCCG CTGGTCCGCA ATGTATGGTC ACTCTTCTCT GCCACTGATG
GTATTAGGCC TGGCGGTGAT GGGCTTTGCG GAACTGTTTA TCGACCCGGT TGCCATGTCG
CAAATTACGC GCATTGAAAT CCCCGGTGTG ACCGGCGTAT TAACCGGCAT CTACATGCTG
CTTTCTGGCG CGATCGCGAA CTATCTGGCG GGCGTGATTG CCGATCAGAC ATCGCAGGCT
TCGTTTGATG CTTCCGGGGC GATCAACTAC TCCATCAATG CATATATTGA AGTATTTGAT
CAAATTACCT GGGGCGCACT GGCGTGTGTA GGACTGGTAC TGATGATTTG GCTGTATCAG
GCGCTGAAAT TCAGAAACCG CGCGCTGGCG CTGGAGTCTT AA
 
Protein sequence
MNKHASQPRA IYYVVALQIW EYFSFYGMRA LLILYLTNQL KYNDTHAYEL FSAYCSLVYV 
TPILGGFLAD KVLGNRMAVM LGALLMAIGH VVLGASEIHP SFLYLSLAII VCGYGLFKSN
VSCLLGELYE PTDPRRDGGF SLMYAAGNVG SIIAPIACGY AQEEYSWAMG FGLAAVGMIA
GLVIFLCGNR HFTHTRGVNK KVLRATNFLL PNWGWLLVLL VATPALITIL FWKEWSVYAL
IVATIIGLGV LAKIYRKAEN QKQRKELGLI VTLTFFSMLF WAFAQQGGSS ISLYIDRFVN
RDMFGYTVPT AMFQSINAFA VMLCGVFLAW VVKESVAGNR TVRIWGKFAL GLGLMSAGFC
ILTLSARWSA MYGHSSLPLM VLGLAVMGFA ELFIDPVAMS QITRIEIPGV TGVLTGIYML
LSGAIANYLA GVIADQTSQA SFDASGAINY SINAYIEVFD QITWGALACV GLVLMIWLYQ
ALKFRNRALA LES