Gene EcDH1_2788 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcDH1_2788 
Symbol 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli DH1 
KingdomBacteria 
Replicon accessionCP001637 
Strand
Start bp2986223 
End bp2987335 
Gene Length1113 bp 
Protein Length370 aa 
Translation table11 
GC content51% 
IMG OID 
Productextracellular solute-binding protein family 1 
Protein accessionACX40421 
Protein GI260449999 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones42 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCGCCT TAAATAAAAA ATGGCTATCG GGTCTGGTTG CGGGTGCTCT GATGGCCGTC 
TCTGTCGGCA CGCTCGCGGC TGAACAAAAA ACACTCCACA TTTATAACTG GTCTGATTAT
ATCGCCCCGG ACACGGTGGC CAATTTTGAA AAAGAAACCG GTATTAAAGT CGTCTACGAT
GTTTTCGACT CTAACGAAGT ACTGGAAGGC AAATTAATGG CCGGGAGTAC CGGCTTTGAT
CTGGTGGTTC CATCTGCCAG CTTTCTGGAG CGCCAGTTGA CTGCGGGAGT TTTCCAGCCG
CTGGACAAAA GCAAATTGCC GGAGTGGAAG AATCTCGACC CGGAACTGCT GAAGCTGGTC
GCCAAACACG ATCCCGACAA TAAATTTGCT ATGCCCTATA TGTGGGCGAC GACCGGGATT
GGCTATAACG TTGATAAAGT TAAAGCGGTG CTGGGCGAAA ACGCGCCCGT CGATAGCTGG
GACTTGATCC TCAAACCTGA AAATCTGGAA AAACTGAAAA GCTGCGGTGT CTCTTTCCTG
GATGCGCCAG AAGAAGTTTT TGCTACCGTG TTGAATTATC TCGGCAAAGA TCCCAACAGC
ACTAAAGCGG ATGATTACAC CGGACCGGCA ACAGATCTGC TGTTAAAGCT GCGCCCGAAC
ATTCGTTATT TCCATTCATC TCAATACATT AACGACCTGG CAAACGGCGA TATTTGCGTC
GCTATCGGCT GGGCAGGTGA TGTCTGGCAG GCGTCAAACC GCGCGAAGGA AGCGAAGAAT
GGCGTGAATG TCTCGTTCTC GATTCCAAAA GAAGGGGCGA TGGCGTTCTT TGATGTATTC
GCCATGCCTG CGGATGCCAA AAACAAAGAC GAAGCCTATC AGTTCCTGAA TTACCTGCTG
CGCCCGGATG TAGTAGCGCA TATTTCCGAC CATGTGTTCT ATGCCAACGC CAATAAAGCA
GCCACGCCGC TGGTGAGTGC GGAAGTCCGT GAGAACCCAG GTATTTATCC GCCTGCGGAT
GTTCGTGCGA AGCTGTTCAC TCTGAAAGTG CAGGATCCGA AAATCGACCG TGTGCGCACC
CGCGCGTGGA CCAAAGTGAA GAGCGGAAAA TAA
 
Protein sequence
MTALNKKWLS GLVAGALMAV SVGTLAAEQK TLHIYNWSDY IAPDTVANFE KETGIKVVYD 
VFDSNEVLEG KLMAGSTGFD LVVPSASFLE RQLTAGVFQP LDKSKLPEWK NLDPELLKLV
AKHDPDNKFA MPYMWATTGI GYNVDKVKAV LGENAPVDSW DLILKPENLE KLKSCGVSFL
DAPEEVFATV LNYLGKDPNS TKADDYTGPA TDLLLKLRPN IRYFHSSQYI NDLANGDICV
AIGWAGDVWQ ASNRAKEAKN GVNVSFSIPK EGAMAFFDVF AMPADAKNKD EAYQFLNYLL
RPDVVAHISD HVFYANANKA ATPLVSAEVR ENPGIYPPAD VRAKLFTLKV QDPKIDRVRT
RAWTKVKSGK