Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcDH1_2764 |
Symbol | |
ID | 0 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli DH1 |
Kingdom | Bacteria |
Replicon accession | CP001637 |
Strand | - |
Start bp | 2960769 |
End bp | 2961884 |
Gene Length | 1116 bp |
Protein Length | 371 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | |
Product | efflux transporter, RND family, MFP subunit |
Protein accession | ACX40397 |
Protein GI | 260449975 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.161658 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAAAAGC GGAAAACCGT GAAGAAGCGT TACGTTATTG CGCTGGTGAT AGTCATCGCC GGACTGATTA CGTTATGGAG AATTCTTAAC GCACCCGTGC CGACTTATCA GACGCTGATT GTGCGCCCCG GTGATTTACA GCAAAGCGTG CTGGCGACCG GAAAGCTGGA CGCGCTGCGT AAGGTTGATG TGGGCGCGCA GGTCAGCGGT CAGTTGAAAA CTCTGTCGGT GGCGATTGGC GATAAAGTAA AAAAAGACCA GCTTTTAGGG GTTATTGATC CTGAACAGGC TGAAAACCAG ATTAAGGAGG TCGAAGCAAC GCTGATGGAG CTACGTGCGC AGCGGCAGCA GGCGGAAGCG GAGCTGAAAC TGGCGCGGGT GACGTATTCC CGTCAGCAAC GTCTGGCACA AACGAAGGCT GTTTCACAGC AGGATCTCGA CACCGCCGCG ACGGAGATGG CTGTGAAACA GGCGCAAATT GGCACCATTG ACGCGCAAAT CAAGCGCAAT CAGGCTTCTC TCGATACGGC TAAAACCAAT CTCGATTACA CTCGCATCGT TGCCCCGATG GCCGGGGAAG TCACGCAAAT CACCACTCTG CAAGGCCAGA CGGTGATTGC CGCACAACAA GCACCGAACA TTCTGACGCT GGCAGATATG AGCGCCATGC TGGTAAAAGC GCAGGTTTCT GAAGCGGATG TAATCCACCT GAAGCCGGGG CAAAAAGCCT GGTTTACGGT GCTTGGCGAT CCACTGACGC GCTACGAGGG GCAAATCAAG GATGTACTAC CGACGCCGGA AAAGGTTAAC GACGCTATTT TCTATTACGC CCGTTTTGAA GTCCCCAACC CCAATGGTTT GCTGCGGCTG GATATGACTG CGCAAGTGCA TATTCAGCTC ACCGATGTGA AAAATGTGCT GACGATCCCT CTGTCGGCGT TAGGCGATCC GGTTGGCGAT AATCGTTATA AAGTCAAATT GTTGCGTAAT GGTGAAACAC GCGAGCGTGA AGTGACGATT GGCGCACGTA ACGATACCGA TGTTGAGATT GTCAAAGGGC TTGAAGCGGG CGATGAAGTG GTGATTGGTG AGGCCAAACC AGGAGCTGCA CAATGA
|
Protein sequence | MKKRKTVKKR YVIALVIVIA GLITLWRILN APVPTYQTLI VRPGDLQQSV LATGKLDALR KVDVGAQVSG QLKTLSVAIG DKVKKDQLLG VIDPEQAENQ IKEVEATLME LRAQRQQAEA ELKLARVTYS RQQRLAQTKA VSQQDLDTAA TEMAVKQAQI GTIDAQIKRN QASLDTAKTN LDYTRIVAPM AGEVTQITTL QGQTVIAAQQ APNILTLADM SAMLVKAQVS EADVIHLKPG QKAWFTVLGD PLTRYEGQIK DVLPTPEKVN DAIFYYARFE VPNPNGLLRL DMTAQVHIQL TDVKNVLTIP LSALGDPVGD NRYKVKLLRN GETREREVTI GARNDTDVEI VKGLEAGDEV VIGEAKPGAA Q
|
| |