Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcDH1_2729 |
Symbol | |
ID | 0 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli DH1 |
Kingdom | Bacteria |
Replicon accession | CP001637 |
Strand | - |
Start bp | 2912750 |
End bp | 2914498 |
Gene Length | 1749 bp |
Protein Length | 582 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | |
Product | lipid A ABC exporter, fused ATPase and inner membrane subunits MsbA |
Protein accession | ACX40362 |
Protein GI | 260449940 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 37 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCATAACG ACAAAGATCT CTCTACGTGG CAGACATTCC GCCGACTGTG GCCAACCATT GCGCCTTTCA AAGCGGGTCT GATCGTGGCG GGCGTAGCGT TAATCCTCAA CGCAGCCAGC GATACCTTCA TGTTATCGCT CCTTAAGCCA CTTCTTGATG ATGGCTTTGG TAAAACAGAT CGCTCCGTGC TGGTGTGGAT GCCGCTGGTG GTGATCGGGC TGATGATTTT ACGTGGTATC ACCAGCTATG TCTCCAGCTA CTGTATCTCC TGGGTATCAG GAAAGGTGGT AATGACCATG CGTCGCCGCC TGTTTGGTCA CATGATGGGA ATGCCAGTTT CATTCTTTGA CAAACAGTCA ACGGGTACGC TGTTGTCACG TATTACCTAC GATTCCGAAC AGGTTGCTTC TTCTTCTTCC GGCGCACTGA TTACTGTTGT GCGTGAAGGT GCGTCGATCA TCGGCCTGTT CATCATGATG TTCTATTACA GTTGGCAACT GTCGATCATT TTGATTGTGC TGGCACCGAT TGTTTCGATT GCGATTCGCG TTGTATCGAA GCGTTTTCGC AACATCAGTA AAAACATGCA GAACACCATG GGGCAGGTGA CCACCAGCGC AGAACAAATG CTGAAGGGCC ACAAAGAAGT ATTGATTTTC GGTGGTCAGG AAGTGGAAAC GAAACGCTTT GATAAAGTCA GCAACCGAAT GCGTCTTCAG GGGATGAAAA TGGTTTCAGC CTCTTCCATC TCTGATCCGA TCATTCAGCT GATCGCCTCT TTGGCGCTGG CGTTTGTTCT GTATGCGGCG AGCTTCCCAA GTGTCATGGA TAGCCTGACT GCCGGTACGA TTACCGTTGT TTTCTCTTCA ATGATTGCAC TGATGCGTCC GCTGAAATCG CTGACCAACG TTAACGCCCA GTTCCAGCGC GGTATGGCGG CTTGTCAGAC GCTGTTTACC ATTCTGGACA GTGAGCAGGA GAAAGATGAA GGTAAGCGCG TGATCGAGCG TGCGACTGGC GACGTGGAAT TCCGCAATGT CACCTTTACT TATCCGGGAC GTGACGTACC TGCATTGCGT AACATCAACC TGAAAATTCC GGCAGGGAAG ACGGTTGCTC TGGTTGGACG CTCTGGTTCG GGTAAATCAA CCATCGCCAG CCTGATCACG CGTTTTTACG ATATTGATGA AGGCGAAATC CTGATGGATG GTCACGATCT GCGCGAGTAT ACCCTGGCGT CGTTACGTAA CCAGGTTGCT CTGGTGTCGC AGAATGTCCA TCTGTTTAAC GATACGGTTG CTAACAACAT TGCTTACGCA CGGACTGAAC AGTACAGCCG TGAGCAAATT GAAGAAGCGG CGCGTATGGC CTACGCCATG GACTTCATCA ATAAGATGGA TAACGGTCTC GATACAGTGA TTGGTGAAAA CGGCGTGCTG CTCTCTGGCG GTCAGCGTCA GCGTATTGCT ATCGCTCGAG CCTTGTTGCG TGATAGCCCG ATTCTGATTC TGGACGAAGC TACCTCGGCT CTGGATACCG AATCCGAACG TGCGATTCAG GCGGCACTGG ATGAGTTGCA GAAAAACCGT ACCTCTCTGG TGATTGCCCA CCGCTTGTCT ACCATTGAAA AGGCAGACGA AATCGTGGTC GTCGAGGATG GTGTCATTGT GGAACGCGGT ACGCATAACG ATTTGCTTGA GCACCGCGGC GTTTACGCGC AACTTCACAA AATGCAGTTT GGCCAATGA
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Protein sequence | MHNDKDLSTW QTFRRLWPTI APFKAGLIVA GVALILNAAS DTFMLSLLKP LLDDGFGKTD RSVLVWMPLV VIGLMILRGI TSYVSSYCIS WVSGKVVMTM RRRLFGHMMG MPVSFFDKQS TGTLLSRITY DSEQVASSSS GALITVVREG ASIIGLFIMM FYYSWQLSII LIVLAPIVSI AIRVVSKRFR NISKNMQNTM GQVTTSAEQM LKGHKEVLIF GGQEVETKRF DKVSNRMRLQ GMKMVSASSI SDPIIQLIAS LALAFVLYAA SFPSVMDSLT AGTITVVFSS MIALMRPLKS LTNVNAQFQR GMAACQTLFT ILDSEQEKDE GKRVIERATG DVEFRNVTFT YPGRDVPALR NINLKIPAGK TVALVGRSGS GKSTIASLIT RFYDIDEGEI LMDGHDLREY TLASLRNQVA LVSQNVHLFN DTVANNIAYA RTEQYSREQI EEAARMAYAM DFINKMDNGL DTVIGENGVL LSGGQRQRIA IARALLRDSP ILILDEATSA LDTESERAIQ AALDELQKNR TSLVIAHRLS TIEKADEIVV VEDGVIVERG THNDLLEHRG VYAQLHKMQF GQ
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