Gene EcDH1_2662 details

Gene Information

• Locus tag: EcDH1_2662
• ID: 0
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Escherichia coli DH1
• Kingdom: Bacteria
• Replicon accession: CP001637
• Strand: +
• Start bp: 2836909
• End bp: 2839089
• Gene Length: 2181 bp
• Protein Length: 726 aa
• Translation table: 11
• GC content: 51%
• Product: capsular exopolysaccharide family
• Protein accession: ACX40295
• Protein GI: 260449873

Plasmid Coverage information

• Num covering plasmid clones: 20
• Plasmid unclonability p-value: 0.149577
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACAACTA AAAATATGAA TACGCCACCA GGCAGCACTC AGGAAAATGA GATCGATCTG 
CTTCGTCTGG TCGGCGAGTT ATGGGATCAC CGTAAGTTTA TTATCAGCGT GACCGCGTTA 
TTCACGCTGA TCGCTGTCGC TTACTCGCTG TTAAGCACAC CAATTTATCA GGCAGATACT 
CTGGTCCAGG TTGAGCAAAA ACAGGGCAAC GCCATTCTCA GCGGCCTGAG CGATATGATC 
CCTAACTCAT CGCCCGAGTC TGCACCGGAG ATCCAACTGC TGCAATCGCG CATGATTCTC 
GGTAAAACCA TTGCTGAACT GAATCTGCGC GACATAGTTG AGCAGAAGTA TTTTCCGATT 
GTGGGTCGCG GCTGGGCGAG ATTAACCAAA GAAAAACCAG GTGAGCTGGC GATCAGCTGG 
ATGCATATTC CACAACTGAA TGGTCAGGAT CAGCAACTGA CACTCACGGT TGGGGAAAAC 
GGCCACTATA CACTGGAAGG TGAAGAGTTC ACCGTCAATG GTATGGTCGG CCAGCGTCTG 
GAAAAAGATG GCGTTGCGCT GACTATCGCG GACATTAAGG CCAAACCAGG AACACAGTTT 
GTCCTGAGCC AGCGTACCGA ACTGGAAGCG ATTAACGCAT TGCAGGAAAC CTTTACCGTT 
AGCGAACGCA GTAAAGAAAG CGGGATGCTG GAACTTACCA TGACTGGTGA TGATCCCCAG 
TTGATTACTC GTATTCTGAA CAGCATCGCT AACAACTATT TGCAACAGAA TATCGCTCGC 
CAGGCGGCGC AGGATTCACA AAGCCTTGAA TTCTTACAGC GCCAGTTACC TGAAGTGCGC 
AGCGAGCTGG ACCAAGCGGA AGAAAAACTC AACGTTTATC GCCAGCAGCG CGATTCGGTT 
GACCTTAACC TGGAAGCCAA AGCCGTTCTT GAGCAGATTG TGAACGTTGA TAATCAACTC 
AATGAGCTGA CCTTCCGCGA GGCAGAGATC TCCCAGCTGT ATAAGAAAGA TCACCCAACT 
TATCGTGCGC TGCTGGAAAA ACGCCAGACG CTGGAGCAAG AACGCAAACG CCTGAATAAG 
CGGGTATCGG CAATGCCTTC CACCCAACAG GAAGTGTTGC GTTTAAGTCG TGACGTAGAA 
GCGGGCCGTG CGGTATATCT GCAATTACTT AACCGCCAGC AGGAGTTGAG TATTTCGAAA 
TCCAGTGCCA TTGGTAACGT GCGGATTATC GACCCGGCAG TCACTCAGCC GCAGCCAGTG 
AAACCGAAAA AAGCGTTGAA CGTGGTGCTT GGTTTTATTC TTGGCCTGTT TATTTCTGTG 
GGTGCCGTGC TGGCGCGTGC GATGTTGCGT CGTGGTGTAG AAGCCCCGGA ACAACTGGAA 
GAGCACGGCA TCAGCGTTTA TGCCACTATC CCAATGTCCG AGTGGCTGGA TAAACGCACC 
CGTCTGCGTA AGAAAAATTT ATTTTCTAAT CAGCAGCGCC ATCGTACTAA AAATATCCCC 
TTCCTGGCGG TGGATAACCC GGCGGATTCT GCTGTGGAAG CCGTACGTGC GCTACGAACC 
AGTCTGCATT TCGCTATGAT GGAGACGGAG AATAACATTC TAATGATCAC CGGTGCGACG 
CCAGACAGTG GTAAAACGTT TGTCAGTTCA ACTCTGGCAG CGGTGATCGC CCAGTCCGAT 
CAAAAAGTGT TATTTATTGA TGCCGACTTA CGCCGTGGTT ATTCGCATAA CCTGTTTACC 
GTGAGTAATG AACATGGCTT GTCGGAATAT CTGGCAGGTA AAGATGAGCT CAACAAAGTG 
ATCCAGCATT TTGGCAAAGG AGGCTTTGAT GTGATTACTC GCGGTCAGGT GCCACCTAAC 
CCGTCTGAAC TGCTGATGCG CGATCGGATG CGTCAATTAC TGGAATGGGC GAACGACCAT 
TACGATCTGG TGATTGTCGA TACGCCGCCG ATGCTGGCGG TGAGTGATGC CGCGGTCGTG 
GGGCGTTCTG TTGGCACCAG CCTGCTGGTT GCGCGTTTTG GCTTGAACAC CGCCAAAGAG 
GTGAGTTTGT CAATGCAGCG TCTGGAACAG GCAGGCGTCA ATATTAAAGG CGCTATCCTC 
AATGGTGTGA TTAAACGCGC CAGCACCGCT TACAGTTACG GCTATAACTA TTACGGTTAT 
AGTTACTCCG AGAAAGAGTA A 

 

Protein sequence

MTTKNMNTPP GSTQENEIDL LRLVGELWDH RKFIISVTAL FTLIAVAYSL LSTPIYQADT 
LVQVEQKQGN AILSGLSDMI PNSSPESAPE IQLLQSRMIL GKTIAELNLR DIVEQKYFPI 
VGRGWARLTK EKPGELAISW MHIPQLNGQD QQLTLTVGEN GHYTLEGEEF TVNGMVGQRL 
EKDGVALTIA DIKAKPGTQF VLSQRTELEA INALQETFTV SERSKESGML ELTMTGDDPQ 
LITRILNSIA NNYLQQNIAR QAAQDSQSLE FLQRQLPEVR SELDQAEEKL NVYRQQRDSV 
DLNLEAKAVL EQIVNVDNQL NELTFREAEI SQLYKKDHPT YRALLEKRQT LEQERKRLNK 
RVSAMPSTQQ EVLRLSRDVE AGRAVYLQLL NRQQELSISK SSAIGNVRII DPAVTQPQPV 
KPKKALNVVL GFILGLFISV GAVLARAMLR RGVEAPEQLE EHGISVYATI PMSEWLDKRT 
RLRKKNLFSN QQRHRTKNIP FLAVDNPADS AVEAVRALRT SLHFAMMETE NNILMITGAT 
PDSGKTFVSS TLAAVIAQSD QKVLFIDADL RRGYSHNLFT VSNEHGLSEY LAGKDELNKV 
IQHFGKGGFD VITRGQVPPN PSELLMRDRM RQLLEWANDH YDLVIVDTPP MLAVSDAAVV 
GRSVGTSLLV ARFGLNTAKE VSLSMQRLEQ AGVNIKGAIL NGVIKRASTA YSYGYNYYGY 
SYSEKE