Gene EcDH1_2657 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcDH1_2657 
Symbol 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli DH1 
KingdomBacteria 
Replicon accessionCP001637 
Strand
Start bp2831787 
End bp2832431 
Gene Length645 bp 
Protein Length214 aa 
Translation table11 
GC content48% 
IMG OID 
Productgroup 4 capsule (G4C) polysaccharide, lipoprotein YmcC 
Protein accessionACX40290 
Protein GI260449868 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.112899 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCGCCCTC TTATTTTATC GATTTTCGCA CTATTTCTTG CGGGATGTAC GCACAGCCAG 
CAAAGTATGG TCGATACATT TCGCGCCAGC CTTTTCGATA ATCAGGATAT CACCGTAGCG
GATCAGCAGA TCCAGGCGTT GCCTTATTCC ACTATGTATT TACGCCTTAA TGAAGGGCAA
CGAATCTTTG TGGTACTGGG ATATATAGAA CAAGAACAAA GCAAATGGTT ATCCCAGGAT
AACGCCATGC TGGTTACCCA CAATGGACGT CTTTTAAAAA CCGTCAAACT TAATAATAAT
CTGCTGGAAG TGACAAATTC CGGGCAGGAC CCTCTGCGTA ACGCGCTGGC AATAAAAGAT
GGCAGCCGCT GGACGCGCGA TATTCTCTGG AGTGAAGACA ACCATTTTCG CTCTGCGACC
CTGAGTTCTA CTTTTTCCTT TGCTGGATTA GAGACGCTGA ATATTGCGGG TCGCAATGTG
CTGTGTAATG TCTGGCAGGA AGAGGTGACT TCCACGCGGC CAGAAAAACA GTGGCAAAAC
ACATTCTGGG TCGATTCGGC TACTGGCCAG GTTCGTCAAA GTCGGCAAAT GTTAGGCGCA
GGGGTTATTC CCGTAGAAAT GACGTTTCTT AAACCCGCAC CATGA
 
Protein sequence
MRPLILSIFA LFLAGCTHSQ QSMVDTFRAS LFDNQDITVA DQQIQALPYS TMYLRLNEGQ 
RIFVVLGYIE QEQSKWLSQD NAMLVTHNGR LLKTVKLNNN LLEVTNSGQD PLRNALAIKD
GSRWTRDILW SEDNHFRSAT LSSTFSFAGL ETLNIAGRNV LCNVWQEEVT STRPEKQWQN
TFWVDSATGQ VRQSRQMLGA GVIPVEMTFL KPAP