Gene EcDH1_2531 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcDH1_2531 
Symbol 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli DH1 
KingdomBacteria 
Replicon accessionCP001637 
Strand
Start bp2703113 
End bp2704312 
Gene Length1200 bp 
Protein Length399 aa 
Translation table11 
GC content54% 
IMG OID 
Productlipoprotein releasing system, transmembrane protein, LolC/E family 
Protein accessionACX40167 
Protein GI260449745 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value3.06464e-08 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTACCAAC CTGTCGCTCT ATTTATTGGC CTGCGTTACA TGCGTGGGCG TGCAGCGGAT 
CGCTTCGGTC GTTTCGTCTC CTGGCTTTCT ACCATCGGCA TTACCCTCGG GGTGATGGCG
CTGGTCACAG TATTGTCAGT GATGAACGGC TTTGAGCGCG AGCTGCAAAA CAACATCCTT
GGCCTGATGC CACAGGCAAT TCTCTCTTCT GAGCATGGCT CTCTTAACCC GCAGCAACTC
CCAGAAACGG CAGTCAAACT GGACGGCGTT AATCGCGTCG CACCTATTAC TACCGGTGAT
GTGGTACTGC AAAGCGCGCG CAGCGTGGCG GTCGGGGTGA TGCTCGGTAT CGACCCGGCG
CAAAAAGATC CACTTACACC GTATCTGGTC AATGTGAAAC AAACTGACCT CGAGCCGGGG
AAATATAATG TCATCCTCGG CGAACAACTT GCCTCACAGC TAGGCGTTAA TCGCGGTGAT
CAAATCCGCG TGATGGTACC ATCTGCCAGC CAGTTCACGC CGATGGGGCG TATTCCAAGC
CAGCGCCTGT TCAATGTGAT TGGCACTTTC GCCGCCAACA GTGAAGTCGA TGGCTATGAA
ATGCTGGTGA ATATTGAGGA TGCCTCGCGT CTGATGCGTT ATCCGGCAGG CAATATTACC
GGCTGGCGTT TGTGGCTGGA TGAGCCGCTG AAAGTCGACT CATTAAGTCA GCAAAAACTG
CCTGAAGGCA GCAAATGGCA GGACTGGCGT GATCGTAAAG GCGAGTTGTT CCAGGCCGTA
CGCATGGAAA AAAATATGAT GGGTTTACTG CTGAGCCTGA TTGTCGCCGT TGCGGCGTTT
AACATTATTA CCTCACTAGG GCTGATGGTA ATGGAGAAGC AGGGCGAAGT AGCGATCCTG
CAAACGCAAG GCTTAACTCC GCGACAAATC ATGATGGTCT TTATGGTGCA AGGGGCCAGC
GCCGGGATTA TCGGTGCGAT CCTCGGAGCG GCGCTTGGCG CCCTGCTTGC CAGCCAGTTA
AATAATCTGA TGCCGATAAT CGGCGTCCTG CTTGATGGCG CGGCGCTGCC GGTGGCTATC
GAACCTTTAC AGGTCATTGT TATTGCGCTG GTGGCGATGG CTATCGCGCT GCTGTCTACG
CTTTACCCTT CATGGCGCGC TGCCGCCACT CAACCCGCTG AGGCTTTACG TTATGAATAA
 
Protein sequence
MYQPVALFIG LRYMRGRAAD RFGRFVSWLS TIGITLGVMA LVTVLSVMNG FERELQNNIL 
GLMPQAILSS EHGSLNPQQL PETAVKLDGV NRVAPITTGD VVLQSARSVA VGVMLGIDPA
QKDPLTPYLV NVKQTDLEPG KYNVILGEQL ASQLGVNRGD QIRVMVPSAS QFTPMGRIPS
QRLFNVIGTF AANSEVDGYE MLVNIEDASR LMRYPAGNIT GWRLWLDEPL KVDSLSQQKL
PEGSKWQDWR DRKGELFQAV RMEKNMMGLL LSLIVAVAAF NIITSLGLMV MEKQGEVAIL
QTQGLTPRQI MMVFMVQGAS AGIIGAILGA ALGALLASQL NNLMPIIGVL LDGAALPVAI
EPLQVIVIAL VAMAIALLST LYPSWRAAAT QPAEALRYE