| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcDH1_2457 |
|---|
| Symbol | |
|---|
| ID | 0 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli DH1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | CP001637 |
|---|
| Strand | + |
|---|
| Start bp | 2636407 |
|---|
| End bp | 2638143 |
|---|
| Gene Length | 1737 bp |
|---|
| Protein Length | 578 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | |
|---|
| Product | sodium/hydrogen exchanger |
|---|
| Protein accession | ACX40097 |
|---|
| Protein GI | 260449675 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.00000000399384 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGGATGCCA CAACAATAAT TAGCCTTTTC ATCTTAGGAT CCATCCTTGT CACCAGCAGT
ATATTACTTA GTTCATTTTC TTCCCGTCTT GGCATTCCTA TTCTGGTTAT TTTTCTGGCG
ATCGGCATGC TGGCAGGAGT CGATGGCGTC GGCGGTATCC CGTTTGATAA TTACCCCTTC
GCCTACATGG TAAGTAACCT GGCACTGGCG ATTATTTTGC TCGACGGCGG GATGCGCACT
CAGGCCAGTT CCTTTCGTGT GGCGTTAGGA CCGGCACTGT CGCTGGCGAC GCTGGGCGTG
CTTATCACCT CTGGTTTAAC CGGCATGATG GCGGCGTGGC TGTTTAATCT TGATTTGATT
GAAGGCTTAT TAATCGGCGC TATCGTCGGC TCTACCGATG CTGCAGCGGT CTTTTCTCTG
CTGGGTGGTA AGGGGCTTAA CGAACGTGTT GGCTCGACGC TGGAAATTGA ATCCGGCAGT
AATGATCCAA TGGCGGTCTT TCTGACGATT ACCCTAATTG CGATGATCCA GCATCATGAG
AGCAATATTA GCTGGATGTT CATTGTCGAT ATTCTGCAAC AATTTGGTCT GGGCATTGTA
ATAGGTCTTG GCGGCGGTTA TTTACTACTG CAAATGATCA ACCGCATCGC CCTGCCCGCC
GGATTATATC CATTGCTGGC ATTAAGTGGC GGTATTCTGA TTTTCTCATT AACTACTGCG
CTGGAAGGTA GCGGTATTCT GGCGGTGTAT CTGTGCGGTT TTCTGCTGGG TAATCGCCCT
ATTCGCAACC GCTACGGCAT CCTGCAAAAT TTCGACGGCC TCGCCTGGCT GGCGCAAATC
GCCATGTTCC TGGTGCTGGG GCTGTTGGTT AACCCAAGCG ATCTGCTGCC TATTGCCATT
CCGGCGCTCA TTTTGTCCGC ATGGATGATA TTCTTCGCCC GTCCCCTTTC GGTATTTGCT
GGATTGCTCC CCTTCCGCGG TTTCAATCTG CGTGAGCGCG TGTTTATCAG CTGGGTAGGA
TTACGCGGCG CGGTGCCAAT CATCCTGGCC GTGTTCCCGA TGATGGCGGG GCTGGAGAAT
GCACGTCTGT TCTTTAATGT CGCCTTCTTT GTGGTTCTGG TTTCACTGCT CTTGCAGGGA
ACATCACTCT CGTGGGCGGC TAAAAAAGCC AAAGTGGTGG TTCCGCCAGT GGGACGTCCG
GTGTCACGCG TTGGCCTGGA TATTCATCCG GAAAATCCGT GGGAGCAGTT TGTTTATCAA
TTGAGTGCCG ATAAATGGTG CGTGGGCGCG GCACTGCGCG ATTTGCATAT GCCAAAAGAG
ACGCGTATTG CGGCACTGTT TCGTGATAAC CAGTTGCTTC ATCCTACCGG CAGCACCCGA
CTGCGCGAAG GCGATGTGTT GTGTGTAATT GGTCGGGAAC GCGATCTTCC GGCGCTCGGT
AAACTGTTCA GCCAGTCGCC GCCGGTCGCG CTGGATCAAC GCTTCTTTGG TGACTTCATT
CTCGAAGCCA GCGCCAAATA TGCTGATGTT GCGCTGATAT ATGGCCTGGA AGACGGGCGA
GAATATCGTG ATAAGCAGCA AACGCTGGGT GAAATTGTCC AGCAGTTGTT AGGCGCGGCA
CCGGTTGTCG GTGACCAGGT AGAGTTTGCC GGGATGATCT GGACGGTGGC CGAGAAAGAA
GATAATGAAG TGTTGAAGAT TGGCGTACGG GTGGCTGAAG AGGAAGCTGA ATCTTAA
|
|---|
| Protein sequence | MDATTIISLF ILGSILVTSS ILLSSFSSRL GIPILVIFLA IGMLAGVDGV GGIPFDNYPF
AYMVSNLALA IILLDGGMRT QASSFRVALG PALSLATLGV LITSGLTGMM AAWLFNLDLI
EGLLIGAIVG STDAAAVFSL LGGKGLNERV GSTLEIESGS NDPMAVFLTI TLIAMIQHHE
SNISWMFIVD ILQQFGLGIV IGLGGGYLLL QMINRIALPA GLYPLLALSG GILIFSLTTA
LEGSGILAVY LCGFLLGNRP IRNRYGILQN FDGLAWLAQI AMFLVLGLLV NPSDLLPIAI
PALILSAWMI FFARPLSVFA GLLPFRGFNL RERVFISWVG LRGAVPIILA VFPMMAGLEN
ARLFFNVAFF VVLVSLLLQG TSLSWAAKKA KVVVPPVGRP VSRVGLDIHP ENPWEQFVYQ
LSADKWCVGA ALRDLHMPKE TRIAALFRDN QLLHPTGSTR LREGDVLCVI GRERDLPALG
KLFSQSPPVA LDQRFFGDFI LEASAKYADV ALIYGLEDGR EYRDKQQTLG EIVQQLLGAA
PVVGDQVEFA GMIWTVAEKE DNEVLKIGVR VAEEEAES
|
|---|
| |