| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcDH1_2337 |
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| Symbol | |
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| ID | 0 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli DH1 |
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| Kingdom | Bacteria |
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| Replicon accession | CP001637 |
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| Strand | - |
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| Start bp | 2507782 |
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| End bp | 2509461 |
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| Gene Length | 1680 bp |
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| Protein Length | 559 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | |
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| Product | alpha amylase catalytic region |
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| Protein accession | ACX39980 |
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| Protein GI | 260449558 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.0459721 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAACAGA AAATTACGGA TTACCTGGAC GAAATCTACG GTGGAACATT TACCGCAACT
CATTTACAGA AACTTGTAAC GCGTCTTGAG AGTGCGAAAC GATTAATTAC ACAGCGACGT
AAAAAACACT GGGATGAAAG TGATGTCGTG TTAATTACCT ATGCCGATCA ATTTCACAGC
AATGATTTAA AACCATTACC CACATTTAAT CAGTTTTACC ATCAATGGCT GCAAAGCATT
TTTTCACATG TTCATTTGTT GCCGTTTTAT CCATGGTCAT CTGATGATGG CTTTTCGGTA
ATTGATTATC ATCAGGTCGC CAGTGAAGCG GGGGAGTGGC AGGATATTCA GCAACTCGGT
GAATGCAGTC ATTTAATGTT TGATTTTGTC TGCAACCATA TGTCGGCAAA AAGTGAATGG
TTTAAAAACT ATTTACAACA GCATCCAGGT TTTGAAGATT TTTTTATTGC CGTTGACCCG
CAAACCGATC TCAGCGCCGT CACTCGCCCG CGTGCGTTAC CGTTATTAAC GCCATTCCAG
ATGCGCGATC ATTCAACGCG CCATTTATGG ACCACCTTTA GTGACGATCA AATTGACCTG
AATTACCGTA GCCCTGAAGT GTTGCTGGCG ATGGTGGATG TTTTACTCTG TTACCTTGCG
AAAGGTGCTG AGTATGTCCG CCTGGATGCC GTTGGCTTTA TGTGGAAAGA GCCGGGAACA
AGCTGCATCC ATCTGGAAAA AACACATCTG ATTATCAAAC TGTTACGGTC GATTATTGAT
AACGTTGCGC CAGGTACAGT GATCATTACC GAGACCAATG TTCCGCATAA AGACAACATT
GCTTACTTTG GCGCAGGCGA TGACGAAGCA CATATGGTGT ACCAGTTCTC GCTGCCGCCA
CTGGTGCTGC ATGCGGTGCA AAAACAGAAC GTTGAGGCGC TTTGTGCGTG GGCGCAAAAC
CTGACACTAC CTTCCAGCAA CACCACCTGG TTTAACTTCC TCGCCTCTCA CGATGGCATC
GGGCTAAACC CGCTACGGGG CTTGTTGCCT GAAAGCGAAA TATTAGAGCT GGTCGAGGCG
TTACAGCAGG AAGGTGCATT AGTAAACTGG AAAAATAATC CCGACGGTAC ACGCAGTCCG
TATGAAATAA ATGTGACCTA TATGGATGCG TTAAGCCGCC GTGAGAGTAG CGATGAAGAA
CGTTGCGCCA GGTTTATCCT TGCCCATGCG ATTTTGTTAA GTTTCCCCGG TGTGCCAGCG
ATATATATTC AAAGTATTCT TGGCTCGCGT AATGATTACG CAGGTGTCGA AAAACTCGGA
TATAACCGTG CGATTAACCG TAAAAAATAT CACAGTAAAG AGATAACCCG AGAACTGAAC
GATGAAGCTA CATTAAGGCA TGCGGTATAT CATGAGTTGT CGCGTTTAAT TACACTTCGT
CGCAGCCATA ACGAGTTTCA TCCGGATAAT AATTTTACCA TTGATACGAT TAATTCATCC
GTAATGCGTA TTCCAAGAAG TAACGCTGAT GGTAATTGTC TGACTGGATT GTTTAATGTC
AGTAAAAATA TTCAGCATGT AAATATTACT AATCTGCATG GTCGGGATCT GATTAGTGAA
GTTGATATAT TGGGTAATGA AATAACGCTG CGCCCCTGGC AGGTTATGTG GATTAAATAA
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| Protein sequence | MKQKITDYLD EIYGGTFTAT HLQKLVTRLE SAKRLITQRR KKHWDESDVV LITYADQFHS
NDLKPLPTFN QFYHQWLQSI FSHVHLLPFY PWSSDDGFSV IDYHQVASEA GEWQDIQQLG
ECSHLMFDFV CNHMSAKSEW FKNYLQQHPG FEDFFIAVDP QTDLSAVTRP RALPLLTPFQ
MRDHSTRHLW TTFSDDQIDL NYRSPEVLLA MVDVLLCYLA KGAEYVRLDA VGFMWKEPGT
SCIHLEKTHL IIKLLRSIID NVAPGTVIIT ETNVPHKDNI AYFGAGDDEA HMVYQFSLPP
LVLHAVQKQN VEALCAWAQN LTLPSSNTTW FNFLASHDGI GLNPLRGLLP ESEILELVEA
LQQEGALVNW KNNPDGTRSP YEINVTYMDA LSRRESSDEE RCARFILAHA ILLSFPGVPA
IYIQSILGSR NDYAGVEKLG YNRAINRKKY HSKEITRELN DEATLRHAVY HELSRLITLR
RSHNEFHPDN NFTIDTINSS VMRIPRSNAD GNCLTGLFNV SKNIQHVNIT NLHGRDLISE
VDILGNEITL RPWQVMWIK
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