Gene EcDH1_2308 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcDH1_2308 
Symbol 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli DH1 
KingdomBacteria 
Replicon accessionCP001637 
Strand
Start bp2476705 
End bp2478231 
Gene Length1527 bp 
Protein Length508 aa 
Translation table11 
GC content49% 
IMG OID 
ProductAbgT transporter family 
Protein accessionACX39952 
Protein GI260449530 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value0.950001 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTATGT CATCCATACC GTCGTCCTCC CAATCCGGGA AGCTCTATGG CTGGGTCGAA 
AGAATTGGTA ACAAGGTTCC CCATCCTTTT CTGCTCTTTA TCTATTTGAT TATCGTACTC
ATGGTGACGA CGGCAATTTT GTCGGCCTTT GGCGTCAGTG CGAAAAACCC GACCGATGGT
ACGCCGGTCG TGGTGAAAAA CCTGCTCAGT GTGGAAGGAT TACACTGGTT TTTACCCAAT
GTTATTAAAA ACTTTAGCGG TTTTGCTCCA CTTGGTGCGA TCCTGGCGCT GGTTTTAGGT
GCCGGTCTGG CGGAGCGCGT CGGCTTACTG CCAGCACTAA TGGTTAAAAT GGCATCGCAT
GTTAATGCCC GCTACGCCAG TTATATGGTG CTGTTTATTG CTTTTTTCAG CCACATTTCT
TCCGATGCGG CGTTAGTGAT CATGCCACCG ATGGGTGCGC TGATTTTTCT GGCGGTGGGC
AGGCATCCAG TTGCAGGTTT ACTGGCTGCC ATTGCAGGCG TAGGTTGCGG CTTTACGGCT
AATTTACTGA TTGTCACAAC CGACGTGTTG CTGTCGGGGA TCAGCACGGA AGCGGCAGCT
GCGTTCAATC CGCAAATGCA CGTCAGTGTA ATTGATAACT GGTATTTTAT GGCCAGCTCC
GTAGTCGTAC TGACGATTGT TGGCGGCCTG ATAACCGACA AAATCATCGA GCCACGGTTA
GGTCAATGGC AGGGAAACAG CGATGAGAAA CTGCAGACAT TGACCGAAAG TCAGCGTTTT
GGTTTACGCA TAGCAGGTGT CGTATCGCTA CTTTTTATTG CTGCGATTGC GCTGATGGTG
ATCCCGCAAA ACGGGATATT GCGCGATCCG ATTAATCACA CCGTGATGCC ATCACCCTTT
ATTAAAGGTA TCGTGCCACT GATCATTCTT TTTTTCTTTG TTGTCTCGCT GGCTTATGGC
ATCGCTACCC GCACAATTCG ACGTCAGGCG GATTTACCGC ATTTAATGAT TGAACCGATG
AAAGAGATGG CGGGATTTAT CGTGATGGTT TTTCCCCTCG CCCAATTTGT CGCCATGTTT
AACTGGAGCA ACATGGGGAA ATTCATCGCC GTGGGGCTGA CCGATATACT GGAAAGTTCA
GGGCTTAGCG GCATCCCGGC GTTTGTCGGT CTGGCGTTGC TTTCCTCTTT CTTATGCATG
TTTATTGCCA GCGGTTCCGC AATCTGGTCG ATTCTCGCCC CCATTTTCGT ACCAATGTTT
ATGCTACTTG GCTTTCACCC GGCATTTGCG CAAATCCTCT TTCGTATTGC CGACTCATCC
GTATTGCCTT TAGCGCCGGT ATCTCCTTTT GTTCCACTGT TTCTTGGATT CCTGCAACGC
TACAAACCAG ACGCGAAACT GGGTACTTAC TATTCGTTAG TCTTGCCCTA TCCACTTATC
TTTTTGGTGG TATGGCTGCT GATGTTGCTG GCGTGGTATC TTGTCGGTCT GCCGATAGGT
CCGGGTATTT ACCCACGTTT GTCTTAA
 
Protein sequence
MSMSSIPSSS QSGKLYGWVE RIGNKVPHPF LLFIYLIIVL MVTTAILSAF GVSAKNPTDG 
TPVVVKNLLS VEGLHWFLPN VIKNFSGFAP LGAILALVLG AGLAERVGLL PALMVKMASH
VNARYASYMV LFIAFFSHIS SDAALVIMPP MGALIFLAVG RHPVAGLLAA IAGVGCGFTA
NLLIVTTDVL LSGISTEAAA AFNPQMHVSV IDNWYFMASS VVVLTIVGGL ITDKIIEPRL
GQWQGNSDEK LQTLTESQRF GLRIAGVVSL LFIAAIALMV IPQNGILRDP INHTVMPSPF
IKGIVPLIIL FFFVVSLAYG IATRTIRRQA DLPHLMIEPM KEMAGFIVMV FPLAQFVAMF
NWSNMGKFIA VGLTDILESS GLSGIPAFVG LALLSSFLCM FIASGSAIWS ILAPIFVPMF
MLLGFHPAFA QILFRIADSS VLPLAPVSPF VPLFLGFLQR YKPDAKLGTY YSLVLPYPLI
FLVVWLLMLL AWYLVGLPIG PGIYPRLS