Gene EcDH1_2305 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcDH1_2305 
Symbol 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli DH1 
KingdomBacteria 
Replicon accessionCP001637 
Strand
Start bp2472829 
End bp2473737 
Gene Length909 bp 
Protein Length302 aa 
Translation table11 
GC content50% 
IMG OID 
Producttranscriptional regulator, LysR family 
Protein accessionACX39949 
Protein GI260449527 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value0.661434 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTTTTC AGGTAAAAAT TCATCAAATT CGGGCTTTTG TTGAAGTGGC TCGTCAGGGC 
AGCATTCGCG GAGCGAGCCG AATGTTGAAT ATGTCGCAAC CGGCACTGAG TAAATCTATT
CAGGAGCTAG AAGAAGGGTT AGCGGCGCAA CTCTTTTTTC GCCGTAGTAA AGGCGTGACG
TTAACTGATG CCGGTGAAAG TTTTTATCAG CACGCCAGTC TAATTCTTGA AGAGCTGCGC
GCAGCCCAAG AGGATATTCG CCAACGACAA GGGCAACTGG CAGGGCAGAT TAATATCGGC
ATGGGGGCCA GTATTTCCCG CAGTCTGATG CCAGCTGTCA TATCTCGTTT TCATCAGCAG
CATCCGCAGG TAAAAGTACG CATTATGGAA GGGCAACTGG TGTCGATGAT TAATGAATTG
CGTCAGGGAG AATTGGATTT CACCATCAAT ACCTATTATC AGGGACCGTA CGACCACGAA
TTTACTTTTG AGAAATTACT GGAAAAGCAA TTCGCGATCT TTTGCCGCCC GGGACACCCC
GCCATTGGTG CCCGTTCGAT CAAACAGTTA CTGGATTACA GCTGGACAAT GCCGACGCCA
CACGGCAGCT ACTACAAACA GTTGAGTGAA TTGCTTGACG ATCAGGCGCA AACGCCACAG
GTCGGTGTAG TCTGCGAGAC GTTCTCAGCC TGTATCAGTC TGGTGGCAAA AAGCGATTTT
CTCAGCAAAC TGCCTGAAGA AATGGGCTGC GATCCCTTGC ACGGACAGGG GCTGGTGATG
TTGCCGGTTA GCGAAATTTT ACCGAAAGCG GCCTATTATT TGATTCAGCG GCGTGATAGT
CGCCAGACAC CACTGACCGC GTCATTAATC ACGCAATTCC GGCGAGAATG CGGCTATCTG
CAAAGTTAA
 
Protein sequence
MAFQVKIHQI RAFVEVARQG SIRGASRMLN MSQPALSKSI QELEEGLAAQ LFFRRSKGVT 
LTDAGESFYQ HASLILEELR AAQEDIRQRQ GQLAGQINIG MGASISRSLM PAVISRFHQQ
HPQVKVRIME GQLVSMINEL RQGELDFTIN TYYQGPYDHE FTFEKLLEKQ FAIFCRPGHP
AIGARSIKQL LDYSWTMPTP HGSYYKQLSE LLDDQAQTPQ VGVVCETFSA CISLVAKSDF
LSKLPEEMGC DPLHGQGLVM LPVSEILPKA AYYLIQRRDS RQTPLTASLI TQFRRECGYL
QS