Gene EcDH1_2280 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcDH1_2280 
Symbol 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli DH1 
KingdomBacteria 
Replicon accessionCP001637 
Strand
Start bp2453239 
End bp2454663 
Gene Length1425 bp 
Protein Length474 aa 
Translation table11 
GC content38% 
IMG OID 
Productpotassium uptake protein, TrkH family 
Protein accessionACX39926 
Protein GI260449504 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTGTGGGT TCCTGGTTTG GCTCTATAGT CTTTCAATGT TGCCACCAAT GGTTGTAGCA 
TTGTTTTATA AAGAAAAAAG CCTGTTTGTT TTCTTTATAA CTTTCGTTAT ATTTTTTTGC
ATTGGTGGCG GAGCGTGGTA TACAACTAAG AAATCTGGCA TTCAATTACG TACCCGTGAT
GGGTTTATTA TAATTGTAAT GTTTTGGATT TTGTTTTCTG TTATTAGTGC ATTCCCTTTA
TGGATTGACT CAGAACTTAA TTTAACGTTC ATTGATGCTC TGTTTGAAGG GGTTTCTGGA
ATAACAACAA CAGGAGCAAC TGTAATTGAT GATGTTAGTT CATTACCTCG GGCATATTTG
TACTATCGGT CACAGTTAAA TTTTATAGGT GGTTTAGGAG TTATTGTTCT GGCGGTTGCT
GTATTGCCAT TATTGGGTAT TGGTGGTGCA AAGCTTTATC AGTCAGAAAT GCCGGGGCCA
TTTAAGGATG ACAAACTCAC TCCCCGCCTG GCCGATACGT CACGGACACT GTGGATAACT
TATTCTTTAT TAGGTATTGC TTGTATTGTC TGTTATAGAC TTGCAGGAAT GCCTTTGTTT
GATGCTATTT GTCACGGGAT TTCCACAGTT TCGCTTGGTG GTTTCTCAAC TCATAGCGAG
AGTATCGGAT ATTTTAATAA CTATTTGGTT GAGCTGGTGG CTGGTTCTTT TTCCCTGCTA
TCGGCTTTCA ACTTCACTCT TTGGTATATT GTTATTAGCA GGAAAACGAT AAAACCTTTA
ATCAGAGATA TTGAACTTCG TTTCTTTCTG TTAATAGCCT TAGGGGTGAT CATTGTTACC
TCTTTCCAGG TCTGGCATAT AGGTATGTAT GACTTGCATG GAAGTTTTAT TCATTCGTTT
TTTCTTGCCA GCTCCATGCT CACTGATAAT GGTTTAGCTA CGCAGGATTA TGCAAGTTGG
CCCACGCACA CGATAGTGTT TTTGCTGTTG TCAAGTTTCT TTGGGGGATG TATAGGTTCA
ACTTGTGGTG GAATTAAGTC ACTTCGATTT CTTATACTTT TCAAACAAAG CAAACACGAG
ATAAATCAGC TTTCTCATCC CAGAGCGTTG TTGAGTGTAA ATGTAGGAGG GAAGATAGTT
ACAGATCGTG TAATGAGGTC TGTATGGAGT TTCTTTTTTC TTTATACTCT CTTCACGGTG
TTTTTTATAC TGGTGTTAAA TGGTATGGGA TATGATTTTC TTACATCATT TGCAACAGTG
GCTGCATGTA TTAATAATAT GGGATTAGGT TTTGGGGCTA CTGCATCGTC ATTCGGAGTG
CTTAATGACA TTGCAAAATG CTTAATGTGC ATAGCTATGA TTCTTGGTCG CCTTGAAATT
TATCCTGTTA TTATATTGTT TTCAGGTTTT TTTTGGCGCT CCTAA
 
Protein sequence
MCGFLVWLYS LSMLPPMVVA LFYKEKSLFV FFITFVIFFC IGGGAWYTTK KSGIQLRTRD 
GFIIIVMFWI LFSVISAFPL WIDSELNLTF IDALFEGVSG ITTTGATVID DVSSLPRAYL
YYRSQLNFIG GLGVIVLAVA VLPLLGIGGA KLYQSEMPGP FKDDKLTPRL ADTSRTLWIT
YSLLGIACIV CYRLAGMPLF DAICHGISTV SLGGFSTHSE SIGYFNNYLV ELVAGSFSLL
SAFNFTLWYI VISRKTIKPL IRDIELRFFL LIALGVIIVT SFQVWHIGMY DLHGSFIHSF
FLASSMLTDN GLATQDYASW PTHTIVFLLL SSFFGGCIGS TCGGIKSLRF LILFKQSKHE
INQLSHPRAL LSVNVGGKIV TDRVMRSVWS FFFLYTLFTV FFILVLNGMG YDFLTSFATV
AACINNMGLG FGATASSFGV LNDIAKCLMC IAMILGRLEI YPVIILFSGF FWRS