Gene EcDH1_2245 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcDH1_2245 
Symbol 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli DH1 
KingdomBacteria 
Replicon accessionCP001637 
Strand
Start bp2413417 
End bp2414007 
Gene Length591 bp 
Protein Length196 aa 
Translation table11 
GC content51% 
IMG OID 
Productphenylacetic acid degradation protein PaaY 
Protein accessionACX39893 
Protein GI260449471 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value0.3221 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCAATTT ATCAGATAGA CGGTCTGACT CCGGTTGTGC CAGAAGAGAG TTTTGTCCAT 
CCGACAGCGG TATTGATCGG CGATGTTATT CTCGGCAAGG GCGTTTACGT TGGGCCAAAT
GCCAGCCTGC GTGGCGATTT TGGTCGTATC GTGGTGAAAG ATGGCGCGAA CATTCAGGAT
AATTGCGTTA TGCACGGTTT TCCCGAGCAG GATACTGTTG TAGGAGAAGA TGGACATATT
GGTCATAGCG CTATCCTTCA CGGCTGCATT ATCCGCCGCA ATGCATTAGT GGGAATGAAC
GCGGTAGTGA TGGACGGTGC GGTGATTGGC GAGAACAGCA TTGTTGGTGC ATCCGCATTT
GTGAAAGCCA AAGCAGAAAT GCCAGCTAAT TACCTGATTG TCGGCAGCCC GGCGAAAGCG
ATTCGTGAAC TCAGTGAGCA GGAGTTGGCA TGGAAAAAGC AGGGTACGCA TGAGTACCAG
GTGCTGGTGA CACGCTGTAA GCAGACGTTA CATCAAGTCG AGCCATTGCG GGAAATTGAA
CCTGGCAGGA AACGCCTGGT ATTTGATGAG AATCTGCGAC CGAAACAGTA A
 
Protein sequence
MPIYQIDGLT PVVPEESFVH PTAVLIGDVI LGKGVYVGPN ASLRGDFGRI VVKDGANIQD 
NCVMHGFPEQ DTVVGEDGHI GHSAILHGCI IRRNALVGMN AVVMDGAVIG ENSIVGASAF
VKAKAEMPAN YLIVGSPAKA IRELSEQELA WKKQGTHEYQ VLVTRCKQTL HQVEPLREIE
PGRKRLVFDE NLRPKQ