Gene EcDH1_2195 details

Gene Information

• Locus tag: EcDH1_2195
• ID: 0
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Escherichia coli DH1
• Kingdom: Bacteria
• Replicon accession: CP001637
• Strand: +
• Start bp: 2355413
• End bp: 2357515
• Gene Length: 2103 bp
• Protein Length: 700 aa
• Translation table: 11
• GC content: 51%
• Product: TonB-dependent receptor
• Protein accession: ACX39845
• Protein GI: 260449423

Plasmid Coverage information

• Num covering plasmid clones: 16
• Plasmid unclonability p-value: 0.0192314
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAGATTT TTTCCGTCCG ACAGACCGTT TTGCCCGCAC TGCTTGTCCT TTCCCCCGTT 
GTTTTTGCCG CTGATGAACA GACTATGATT GTCAGTGCCG CACCGCAGGT GGTTTCAGAA 
CTGGATACCC CAGCAGCAGT AAGCGTGGTG GATGGCGAGG AGATGCGCCT GGCAACACCG 
CGCATTAACT TGTCCGAATC ACTGACCGGC GTGCCTGGTT TGCAGGTACA AAACCGGCAG 
AACTATGCGC AAGATTTACA GCTGTCGATT CGCGGATTTG GCTCCCGCTC CACTTACGGT 
ATTCGCGGTA TTCGCCTGTA TGTGGACGGT ATTCCCGCCA CCATGCCCGA CGGGCAAGGG 
CAAACATCCA ACATCGATTT AAGCAGTGTG CAAAATGTGG AAGTGCTGCG TGGCCCCTTC 
TCTGCCCTGT ATGGCAACGC GTCTGGTGGG GTAATGAATG TCACCACCCA GACCGGACAA 
CAGCCACCAA CCATTGAAGC CAGTAGTTAC TACGGCAGTT TTGGCAGCTG GCGCTATGGG 
CTGAAAGCAA CGGGCGCAAC GGGAGACGGC ACACAGCCTG GCGATGTCGA TTACACCGTC 
TCAACCACGC GTTTTACGAC CCACGGCTAT CGTGACCATA GTGGCGCACA GAAAAATTTA 
GCCAATGCCA AACTGGGCGT ACGCATTGAT GAAGCCAGCA AATTAAGTCT GATTTTCAAT 
AGTGTGGATA TCAAAGCAGA TGACCCAGGT GGGCTAACCA AAGCAGAATG GAAGGCTAAT 
CCACAACAAG CGCCTCGTGC AGAACAGTAC GACACGCGAA AAACCATCAA GCAAACTCAG 
GCTGGGTTGC GCTATGAGCG TAGCCTGAGT TCGCGGGATG ATATGAGTGT GATGATGTAT 
GCCGGAGAGC GAGAAACGAC CCAGTACCAG TCAATACCCA TGGCACCACA ACTTAACCCG 
TCACATGCGG GCGGCGTGAT TACCCTGCAA CGCCATTACC AGGGAATAGA CAGCCGCTGG 
ACACACCGTG GTGAACTGGG CGTTCCGGTC ACGTTCACTA CCGGCCTGAA CTACGAAAAC 
ATGAGTGAAA ACCGCAAGGG CTACAATAAC TTCCGCCTGA ATAGCGGCAT GCCGGAGTAC 
GGGCAAAAAG GTGAGTTGCG TCGCGACGAA CGCAATCTGA TGTGGAACAT CGATCCCTAT 
TTACAGACGC AGTGGCAGCT GAGCGAAAAA CTGTCGCTGG ATGCTGGCGT GCGCTACAGC 
TCCGTGTGGT TTGATTCCAA CGACCATTAC GTTACTCCGG GTAACGGCGA TGACAGCGGT 
GATGCCAGTT ATCATAAATG GCTACCTGCC GGTTCGTTAA AATATGCAAT GACCGATGCC 
TGGAATATCT ATCTGGCAGC CGGGCGAGGT TTTGAAACGC CGACGATTAA TGAGCTGTCT 
TATCGTGCTG ATGGGCAAAG CGGTATGAAC TTAGGTTTAA AACCATCCAC CAACGATACA 
ATTGAGATCG GCAGTAAAAC GCGTATTGGT GATGGGCTGC TTAGTCTCGC ATTGTTTCAG 
ACCGACACTG ATGATGAAAT TGTTGTCGAT AGCAGTAGCG GTGGGCGTAC GACTTACAAA 
AATGCCGGAA AGACCCGTCG TCAAGGCGCT GAACTGGCAT GGGATCAACG TTTCGCAGGA 
GATTTTCGCG TAAACGCGTC CTGGACCTGG CTTGATGCGA CCTATCGCAG CAATGTTTGC 
AATGAACAGG ATTGTAACGG TAATCGGATG CCAGGGATCG CCCGTAATAT GGGCTTTGCG 
TCGATAGGTT ATGTACCGGA AGATGGTTGG TATGCAGGCA CGGAAGCGCG TTATATGGGC 
GATATTATGG CAGATGATGA AAATACGGCA AAAGCGCCGT CTTATACTCT CGTCGGCTTA 
TTCACCGGGT ATAAATACAA TTACCACAAT TTAACTGTGG ATTTATTTGG TCGTGTCGAT 
AATTTATTCG ATAAAGAATA CGTTGGTTCT GTCATTGTCA ATGAGTCAAA CGGGCGATAT 
TACGAACCTT CGCCCGGACG AAATTATGGT GTCGGCATGA ATATTGCGTG GAGATTTGAG 
TAA 

 

Protein sequence

MKIFSVRQTV LPALLVLSPV VFAADEQTMI VSAAPQVVSE LDTPAAVSVV DGEEMRLATP 
RINLSESLTG VPGLQVQNRQ NYAQDLQLSI RGFGSRSTYG IRGIRLYVDG IPATMPDGQG 
QTSNIDLSSV QNVEVLRGPF SALYGNASGG VMNVTTQTGQ QPPTIEASSY YGSFGSWRYG 
LKATGATGDG TQPGDVDYTV STTRFTTHGY RDHSGAQKNL ANAKLGVRID EASKLSLIFN 
SVDIKADDPG GLTKAEWKAN PQQAPRAEQY DTRKTIKQTQ AGLRYERSLS SRDDMSVMMY 
AGERETTQYQ SIPMAPQLNP SHAGGVITLQ RHYQGIDSRW THRGELGVPV TFTTGLNYEN 
MSENRKGYNN FRLNSGMPEY GQKGELRRDE RNLMWNIDPY LQTQWQLSEK LSLDAGVRYS 
SVWFDSNDHY VTPGNGDDSG DASYHKWLPA GSLKYAMTDA WNIYLAAGRG FETPTINELS 
YRADGQSGMN LGLKPSTNDT IEIGSKTRIG DGLLSLALFQ TDTDDEIVVD SSSGGRTTYK 
NAGKTRRQGA ELAWDQRFAG DFRVNASWTW LDATYRSNVC NEQDCNGNRM PGIARNMGFA 
SIGYVPEDGW YAGTEARYMG DIMADDENTA KAPSYTLVGL FTGYKYNYHN LTVDLFGRVD 
NLFDKEYVGS VIVNESNGRY YEPSPGRNYG VGMNIAWRFE