Gene EcDH1_2193 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcDH1_2193 
Symbol 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli DH1 
KingdomBacteria 
Replicon accessionCP001637 
Strand
Start bp2352498 
End bp2353997 
Gene Length1500 bp 
Protein Length499 aa 
Translation table11 
GC content52% 
IMG OID 
Productamino acid permease-associated region 
Protein accessionACX39843 
Protein GI260449421 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value3.36047e-10 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTAAAC ACGACACCGA CACTTCAGAT CAACACGCCG CGAAACGCCG CTGGCTTAAT 
GCCCACGAAG AGGGGTATCA CAAAGCGATG GGCAATCGCC AGGTGCAGAT GATCGCCATT
GGCGGCGCGA TTGGCACCGG CTTGTTTTTA GGTGCAGGAG CCCGACTGCA AATGGCGGGG
CCCGCACTGG CACTGGTTTA TTTAATTTGT GGCTTGTTTT CGTTTTTTAT TCTGCGTGCA
TTGGGTGAGC TGGTGCTACA CCGCCCTTCC AGTGGCAGTT TTGTTTCTTA TGCCCGTGAG
TTTTTGGGTG AGAAAGCCGC TTATGTTGCT GGCTGGATGT ACTTCATCAA CTGGGCGATG
ACGGGGATTG TTGATATTAC CGCCGTCGCT CTGTATATGC ATTACTGGGG TGCGTTTGGC
GGCGTGCCGC AGTGGGTCTT TGCGCTCGCT GCACTTACCA TCGTTGGCAC CATGAATATG
ATCGGTGTGA AATGGTTTGC GGAGATGGAG TTCTGGTTTG CGCTTATTAA AGTGCTCGCC
ATTGTGACCT TTTTGGTCGT GGGTACAGTG TTCCTCGGTA GTGGTCAGCC GCTGGATGGC
AACACCACTG GCTTTCATTT AATCACCGAT AATGGCGGCT TCTTCCCCCA CGGTTTGCTG
CCTGCGCTGG TGTTGATTCA GGGCGTAGTG TTTGCTTTTG CCTCCATTGA AATGGTGGGT
ACAGCTGCCG GAGAATGTAA AGATCCGCAG ACCATGGTGC CTAAAGCCAT TAACAGTGTG
ATTTGGCGTA TTGGCCTGTT TTACGTCGGC TCCGTGGTGT TGCTGGTTAT GTTATTGCCG
TGGAGCGCGT ATCAGGCGGG GCAAAGTCCG TTCGTGACGT TTTTCTCTAA ACTGGGTGTG
CCATATATCG GCAGCATTAT GAACATTGTG GTGCTGACCG CTGCCCTCTC CAGCCTGAAT
TCAGGTCTGT ACTGCACCGG ACGTATTCTG CGCTCAATGG CGATGGGCGG TTCCGCACCG
AGTTTTATGG CGAAAATGAG TCGTCAGCAT GTGCCGTATG CCGGGATTCT GGCGACACTA
GTTGTGTATG TCGTCGGCGT ATTCCTCAAC TATCTGGTGC CGTCGCGCGT ATTTGAGATT
GTGTTGAACT TCGCGTCGCT GGGAATCATC GCTTCATGGG CGTTTATCAT CGTGTGCCAG
ATGCGCCTGC GTAAAGCGAT TAAAGAAGGC AAAGCAGCGG ATGTCAGTTT TAAACTGCCT
GGCGCGCCCT TCACTTCCTG GCTGACATTA CTGTTTTTAC TGAGTGTCCT TGTGCTGATG
GCGTTCGATT ACCCGAACGG GACTTATACT ATCGCGGCGC TGCCGATTAT CGGTATTTTG
CTGGTTATAG GCTGGTTTGG TGTGCGCAAA CGCGTTGCTG AAATTCACAG CACTGCGCCA
GTCGTCGAGG AAGATGAAGA AAAACAGGAA ATTGTGTTTA AGCCTGAAAC GGCGAGTTAA
 
Protein sequence
MSKHDTDTSD QHAAKRRWLN AHEEGYHKAM GNRQVQMIAI GGAIGTGLFL GAGARLQMAG 
PALALVYLIC GLFSFFILRA LGELVLHRPS SGSFVSYARE FLGEKAAYVA GWMYFINWAM
TGIVDITAVA LYMHYWGAFG GVPQWVFALA ALTIVGTMNM IGVKWFAEME FWFALIKVLA
IVTFLVVGTV FLGSGQPLDG NTTGFHLITD NGGFFPHGLL PALVLIQGVV FAFASIEMVG
TAAGECKDPQ TMVPKAINSV IWRIGLFYVG SVVLLVMLLP WSAYQAGQSP FVTFFSKLGV
PYIGSIMNIV VLTAALSSLN SGLYCTGRIL RSMAMGGSAP SFMAKMSRQH VPYAGILATL
VVYVVGVFLN YLVPSRVFEI VLNFASLGII ASWAFIIVCQ MRLRKAIKEG KAADVSFKLP
GAPFTSWLTL LFLLSVLVLM AFDYPNGTYT IAALPIIGIL LVIGWFGVRK RVAEIHSTAP
VVEEDEEKQE IVFKPETAS