Gene EcDH1_2159 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcDH1_2159 
Symbol 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli DH1 
KingdomBacteria 
Replicon accessionCP001637 
Strand
Start bp2315402 
End bp2315983 
Gene Length582 bp 
Protein Length193 aa 
Translation table11 
GC content53% 
IMG OID 
Productpeptidase M15D vanX D-ala-D-ala dipeptidase 
Protein accessionACX39811 
Protein GI260449389 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.00101458 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCGGATA CCACCGAACT GGTTGATTTA GCCGTAATCT TCCCTGATCT GGAGATCGAA 
TTGAAATACG CCTGCGCTGA TAACATCACA GGTAAAGCTA TTTATCAGCA AGCGCGTTGT
CTGTTACACA AGGATGCGAT TACCGCGCTG GCGAAAAGTA TCAGCATCGC CCAGCTGTCA
GGGTTACAAC TGGTGATTTA CGATGCGTAT CGCCCACAAC AAGCACAGGC GATGTTGTGG
CAAGCCTGCC CAGACCCGCA ATATGTTGTT GATGTGACGG TCGGTTCTAA TCACAGCCGT
GGCACGGCGA TCGACCTGAC GCTTCGTGAT GAGCACGGGA ACATCCTCGA TATGGGCGCA
GGGTTCGATG AAATGCACGA GCGCTCCCAT GCCTATCACC CTTCCGTCCC GCCCGCCGCT
CAGCGCAATC GGCTGTTGCT GAATGCGATA ATGACTGGTG GCGGTTTTGT CGGTATCTCC
AGCGAATGGT GGCACTTCGA ATTACCCCAG GCAGCGAGTT ACCCTCTGCT CGCTGATCAA
TTCTCTTGTT TTATATCCCC TGGCACACAG CACGTCAGTT AA
 
Protein sequence
MSDTTELVDL AVIFPDLEIE LKYACADNIT GKAIYQQARC LLHKDAITAL AKSISIAQLS 
GLQLVIYDAY RPQQAQAMLW QACPDPQYVV DVTVGSNHSR GTAIDLTLRD EHGNILDMGA
GFDEMHERSH AYHPSVPPAA QRNRLLLNAI MTGGGFVGIS SEWWHFELPQ AASYPLLADQ
FSCFISPGTQ HVS