Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcDH1_2156 |
Symbol | |
ID | 0 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli DH1 |
Kingdom | Bacteria |
Replicon accession | CP001637 |
Strand | + |
Start bp | 2309655 |
End bp | 2310974 |
Gene Length | 1320 bp |
Protein Length | 439 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | |
Product | protein of unknown function DUF187 |
Protein accession | ACX39808 |
Protein GI | 260449386 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 0.360071 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGATATCT GCTCCCGAAA CAAGAAATTA ACGATTAGAA GACCAGCGAT ACTAGTTGCA CTGGCACTTT TACTGTGTAG TTGTAAAAGC ACGCCTCCAG AGTCCATGGT GACACCACCA GCAGGTTCAA AGCCACCAGC CACGACGCAA CAATCGTCAC AACCGATGCG TGGCATCTGG CTGGCCACGG TTTCTCGGCT CGACTGGCCA CCGGTTTCCT CGGTTAACAT TAGTAACCCC ACCAGCCGGG CCCGTGTACA ACAACAGGCG ATGATCGACA AACTGGATCA TCTGCAACGT CTCGGCATAA ACACGGTCTT TTTCCAGGTC AAGCCGGACG GTACCGCCCT GTGGCCATCG AAAATTTTGC CGTGGTCCGA TCTTATGACC GGTAAGATTG GTGAAAATCC GGGTTACGAT CCGCTGCAAT TTATGCTCGA CGAAGCCCAC AAGCGTGGGA TGAAAGTACA CGCCTGGTTT AACCCCTATC GCGTATCGGT TAATACGAAG CCCGGTACTA TCAGGGAACT GAATAGCACT CTGTCTCAAC AACCGGCGAG CGTCTATGTG CAACACCGCG ACTGGATCAG AACGTCTGGC GATCGCTTTG TCCTCGACCC GGGCATCCCT GAGGTTCAGG ACTGGATCAC ATCAATAGTC GCAGAAGTGG TTTCCCGCTA TCCCGTAGAT GGCGTGCAGT TTGACGACTA TTTCTATACG GAGTCACCGG GTTCACGGCT AAATGATAAC GAAACGTACC GTAAATACGG AGGCGCATTT GCGTCAAAAG CAGACTGGCG GCGCAACAAT ACTCAGCAGT TAATTGCAAA GGTATCGCAC ACCATTAAAA GCATTAAGCC GGGAGTCGAA TTTGGTGTTA GCCCGGCAGG CGTGTGGCGT AACCGATCAC ACGATCCGCT CGGTTCCGAT ACCCGAGGCG CGGCAGCCTA TGACGAATCC TACGCTGACA CCCGTCGATG GGTGGAACAA GGATTGCTGG ATTACATTGC TCCCCAAATT TACTGGCCGT TCTCACGGAG TGCCGCGCGT TATGACGTGT TGGCAAAATG GTGGGCGGAT GTCGTTAAAC CGACCAGGAC CCGCCTGTAT ATCGGTATCG CCTTCTATAA AGTGGGTGAA CCTTCAAAGA TAGAGCCAGA CTGGATGATT AACGGCGGCG TACCGGAACT GAAAAAGCAG CTCGATCTTA ACGATGCTGT GCCCGAAATT AGCGGCACCA TCTTGTTCCG TGAGGACTAT CTGAATAAAC CGCAGACTCA ACAAGCGGTC AGCTATCTGC AAAGTCGCTG GGGCAGTTAA
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Protein sequence | MDICSRNKKL TIRRPAILVA LALLLCSCKS TPPESMVTPP AGSKPPATTQ QSSQPMRGIW LATVSRLDWP PVSSVNISNP TSRARVQQQA MIDKLDHLQR LGINTVFFQV KPDGTALWPS KILPWSDLMT GKIGENPGYD PLQFMLDEAH KRGMKVHAWF NPYRVSVNTK PGTIRELNST LSQQPASVYV QHRDWIRTSG DRFVLDPGIP EVQDWITSIV AEVVSRYPVD GVQFDDYFYT ESPGSRLNDN ETYRKYGGAF ASKADWRRNN TQQLIAKVSH TIKSIKPGVE FGVSPAGVWR NRSHDPLGSD TRGAAAYDES YADTRRWVEQ GLLDYIAPQI YWPFSRSAAR YDVLAKWWAD VVKPTRTRLY IGIAFYKVGE PSKIEPDWMI NGGVPELKKQ LDLNDAVPEI SGTILFREDY LNKPQTQQAV SYLQSRWGS
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