| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcDH1_2156 |
|---|
| Symbol | |
|---|
| ID | 0 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli DH1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | CP001637 |
|---|
| Strand | + |
|---|
| Start bp | 2309655 |
|---|
| End bp | 2310974 |
|---|
| Gene Length | 1320 bp |
|---|
| Protein Length | 439 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | |
|---|
| Product | protein of unknown function DUF187 |
|---|
| Protein accession | ACX39808 |
|---|
| Protein GI | 260449386 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 0.360071 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGATATCT GCTCCCGAAA CAAGAAATTA ACGATTAGAA GACCAGCGAT ACTAGTTGCA
CTGGCACTTT TACTGTGTAG TTGTAAAAGC ACGCCTCCAG AGTCCATGGT GACACCACCA
GCAGGTTCAA AGCCACCAGC CACGACGCAA CAATCGTCAC AACCGATGCG TGGCATCTGG
CTGGCCACGG TTTCTCGGCT CGACTGGCCA CCGGTTTCCT CGGTTAACAT TAGTAACCCC
ACCAGCCGGG CCCGTGTACA ACAACAGGCG ATGATCGACA AACTGGATCA TCTGCAACGT
CTCGGCATAA ACACGGTCTT TTTCCAGGTC AAGCCGGACG GTACCGCCCT GTGGCCATCG
AAAATTTTGC CGTGGTCCGA TCTTATGACC GGTAAGATTG GTGAAAATCC GGGTTACGAT
CCGCTGCAAT TTATGCTCGA CGAAGCCCAC AAGCGTGGGA TGAAAGTACA CGCCTGGTTT
AACCCCTATC GCGTATCGGT TAATACGAAG CCCGGTACTA TCAGGGAACT GAATAGCACT
CTGTCTCAAC AACCGGCGAG CGTCTATGTG CAACACCGCG ACTGGATCAG AACGTCTGGC
GATCGCTTTG TCCTCGACCC GGGCATCCCT GAGGTTCAGG ACTGGATCAC ATCAATAGTC
GCAGAAGTGG TTTCCCGCTA TCCCGTAGAT GGCGTGCAGT TTGACGACTA TTTCTATACG
GAGTCACCGG GTTCACGGCT AAATGATAAC GAAACGTACC GTAAATACGG AGGCGCATTT
GCGTCAAAAG CAGACTGGCG GCGCAACAAT ACTCAGCAGT TAATTGCAAA GGTATCGCAC
ACCATTAAAA GCATTAAGCC GGGAGTCGAA TTTGGTGTTA GCCCGGCAGG CGTGTGGCGT
AACCGATCAC ACGATCCGCT CGGTTCCGAT ACCCGAGGCG CGGCAGCCTA TGACGAATCC
TACGCTGACA CCCGTCGATG GGTGGAACAA GGATTGCTGG ATTACATTGC TCCCCAAATT
TACTGGCCGT TCTCACGGAG TGCCGCGCGT TATGACGTGT TGGCAAAATG GTGGGCGGAT
GTCGTTAAAC CGACCAGGAC CCGCCTGTAT ATCGGTATCG CCTTCTATAA AGTGGGTGAA
CCTTCAAAGA TAGAGCCAGA CTGGATGATT AACGGCGGCG TACCGGAACT GAAAAAGCAG
CTCGATCTTA ACGATGCTGT GCCCGAAATT AGCGGCACCA TCTTGTTCCG TGAGGACTAT
CTGAATAAAC CGCAGACTCA ACAAGCGGTC AGCTATCTGC AAAGTCGCTG GGGCAGTTAA
|
|---|
| Protein sequence | MDICSRNKKL TIRRPAILVA LALLLCSCKS TPPESMVTPP AGSKPPATTQ QSSQPMRGIW
LATVSRLDWP PVSSVNISNP TSRARVQQQA MIDKLDHLQR LGINTVFFQV KPDGTALWPS
KILPWSDLMT GKIGENPGYD PLQFMLDEAH KRGMKVHAWF NPYRVSVNTK PGTIRELNST
LSQQPASVYV QHRDWIRTSG DRFVLDPGIP EVQDWITSIV AEVVSRYPVD GVQFDDYFYT
ESPGSRLNDN ETYRKYGGAF ASKADWRRNN TQQLIAKVSH TIKSIKPGVE FGVSPAGVWR
NRSHDPLGSD TRGAAAYDES YADTRRWVEQ GLLDYIAPQI YWPFSRSAAR YDVLAKWWAD
VVKPTRTRLY IGIAFYKVGE PSKIEPDWMI NGGVPELKKQ LDLNDAVPEI SGTILFREDY
LNKPQTQQAV SYLQSRWGS
|
|---|
| |