| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcDH1_2141 |
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| Symbol | |
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| ID | 0 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli DH1 |
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| Kingdom | Bacteria |
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| Replicon accession | CP001637 |
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| Strand | + |
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| Start bp | 2288477 |
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| End bp | 2289625 |
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| Gene Length | 1149 bp |
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| Protein Length | 382 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | |
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| Product | fimbrial biogenesis outer membrane usher protein |
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| Protein accession | ACX39794 |
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| Protein GI | 260449372 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.0000830223 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAGTGGTT ACACCGTCAA GCCTCCTACC GGAGACACCA ATGAGCAGAC ACAATTTATT
GATTATTTTA ATCTGTTCTA CAGTAAGCGT GGTCAGGAAC AAATAAGCAT CTCTCAGCAG
CTTGGAAATT ACGGTACGAC ATTTTTCAGT GCCAGTCGCC AAAGTTACTG GAACACGTCA
CGCAGCGACC AGCAAATATC ATTTGGATTA AATGTGCCGT TTGGTGATAT TACGACTTCG
CTGAATTACA GCTATTCCAA TAATATATGG CAAAACGATC GGGATCATTT ACTCGCTTTT
ACGCTTAATG TTCCCTTCAG TCATTGGATG CGTACAGACA GTCAGTCGGC ATTTCGTAAT
TCAAACGCCA GTTACAGTAT GTCAAACGAT TTGAAAGGCG GCATGACCAA TCTATCGGGG
GTTTATGGCA CTCTGCTGCC GGATAATAAC CTGAATTATA GCGTTCAGGT CGGTAACACC
CACGGAGGTA ATACATCGTC TGGCACCAGT GGTTACAGTT CTCTTAATTA TCGTGGAGCT
TATGGTAATA CTAATGTCGG TTACAGTCGG AGTGGTGACA GCAGCCAGAT TTATTACGGA
ATGAGTGGTG GGATTATTGC TCATGCTGAT GGCATCACCT TTGGACAGCC GCTGGGCGAC
ACAATGGTTC TGGTTAAGGC TCCTGGTGCT GATAATGTCA AAATAGAGAA CCAGACCGGA
ATTCATACCG ACTGGCGTGG CTATGCCATA TTACCATTTG CGACAGAATA TAGAGAAAAC
CGTGTTGCTC TTAACGCGAA TTCCCTTGCA GATAATGTTG AACTGGATGA AACCGTGGTC
ACTGTCATCC CAACTCACGG TGCTATTGCC AGAGCAACAT TTAATGCACA AATCGGCGGG
AAAGTATTAA TGACGTTGAA GTACGGTAAT AAGAGCGTTC CATTCGGTGC AATTGTCACA
CACGGAGAGA ATAAAAATGG CAGCATTGTC GCGGAAAATG GTCAGGTTTA TCTGACTGGA
CTTCCACAGT CAGGGCAATT ACAGGTTTCA TGGGGCAAAG ATAAAAACTC AAACTGTATT
GTCGAGTACA AGCTTCCTGA AGTTTCTCCT GGTACCTTAC TGAACCAGCA GACAGCAATC
TGTCGCTAA
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| Protein sequence | MSGYTVKPPT GDTNEQTQFI DYFNLFYSKR GQEQISISQQ LGNYGTTFFS ASRQSYWNTS
RSDQQISFGL NVPFGDITTS LNYSYSNNIW QNDRDHLLAF TLNVPFSHWM RTDSQSAFRN
SNASYSMSND LKGGMTNLSG VYGTLLPDNN LNYSVQVGNT HGGNTSSGTS GYSSLNYRGA
YGNTNVGYSR SGDSSQIYYG MSGGIIAHAD GITFGQPLGD TMVLVKAPGA DNVKIENQTG
IHTDWRGYAI LPFATEYREN RVALNANSLA DNVELDETVV TVIPTHGAIA RATFNAQIGG
KVLMTLKYGN KSVPFGAIVT HGENKNGSIV AENGQVYLTG LPQSGQLQVS WGKDKNSNCI
VEYKLPEVSP GTLLNQQTAI CR
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