Gene EcDH1_2084 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcDH1_2084 
Symbol 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli DH1 
KingdomBacteria 
Replicon accessionCP001637 
Strand
Start bp2235237 
End bp2235989 
Gene Length753 bp 
Protein Length250 aa 
Translation table11 
GC content48% 
IMG OID 
Productantitermination protein 
Protein accessionACX39740 
Protein GI260449318 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value5.8866e-05 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACCTTG AAGCCTTACC AAAATATTAC TCCCCAAAAT CTCCAAAATT GAGCGATGAC 
GCTCCAGCGA CAGGCACCGG TTGTTTAACA ATTACGGATG TAATGGCAGC GCAGGGGATG
GTGCAGTCGA AAGCACCACT TGGGTTGGCC TTATTTCTGG CAAAAGTTGG TGTTCAGGAC
CCTCAGTTTG CGATTGAAGG CCTGCTAAAT TACGCGATGG CACTGGATAA CCCGACATTG
AACAAATTGA GTGAAGAAAT CCGGTTACAG ATTATTCCTT ACCTCGTGAG TTTTGCCTTT
GCTGATTACT CCAGGTCTGC GGCAAGTAAG GCTCGCTGTG AGCATTGTTC AGGTACGGGA
TTTTATAATG TATTGCGCGA AGTGGTGAAA CACTACAGAC GCGGGGAATC TGTAATCAAG
GAAGAATGGG TGAAGGAACT ATGTCAGCAT TGCCATGGTA AGGGCGAAGC CAGCACAGCG
TGCAGAGGGT GTAAGGGTAA AGGGATTGTT CTGGATGAAA AAAGAACCCG GTTTCATGGC
GTACCGGTAT ATAAGATTTG TGGGCGTTGT AATGGAAACC GGTTTAGTCG TTTACCGACC
ACGCTGGCAC GACGTCATGT CCAGAAGCTG GTACCAGACC TGACCGATTA TCAGTGGTAT
AAGGGGTATG CGGACGTCAT TGGTAAACTG GTAACAAAGT GCTGGCAGGA AGAAGCATAC
GCGGAAGCGC AATTGAGGAA GGTGACGAGA TAA
 
Protein sequence
MNLEALPKYY SPKSPKLSDD APATGTGCLT ITDVMAAQGM VQSKAPLGLA LFLAKVGVQD 
PQFAIEGLLN YAMALDNPTL NKLSEEIRLQ IIPYLVSFAF ADYSRSAASK ARCEHCSGTG
FYNVLREVVK HYRRGESVIK EEWVKELCQH CHGKGEASTA CRGCKGKGIV LDEKRTRFHG
VPVYKICGRC NGNRFSRLPT TLARRHVQKL VPDLTDYQWY KGYADVIGKL VTKCWQEEAY
AEAQLRKVTR