Gene EcDH1_2083 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcDH1_2083 
Symbol 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli DH1 
KingdomBacteria 
Replicon accessionCP001637 
Strand
Start bp2234174 
End bp2235223 
Gene Length1050 bp 
Protein Length349 aa 
Translation table11 
GC content52% 
IMG OID 
Productprotein of unknown function DUF1277 
Protein accessionACX39739 
Protein GI260449317 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.000880511 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCGGGTAT TACTTAGACC TGTTCTGGTG CCTGAGCTTG GGCTGGTGGT CCTTAAGCCG 
GGCCGTGAAT CCATACAGAT ATTTCATAAT CCTCGAGTGC TGGTGGAACC GGAACCAAAA
AGCATGCGTA ATCTGCCATC CGGAGTCGTT CCTGCCGTTC GCCAGCCGCT GGCGGAAGAC
AAAACATTGC TGCCGTTTTT TAGTAACGAA CGGGTGATTC GTGCTGCTGG CGGCGTTGGC
GCATTGTCCG ACTGGCTATT ACGTCATGTT ACATCCTGCC AGTGGCCTAA TGGCGATTAC
CATCACACTG AAACAGTCAT TCACCGTTAT GGTACCGGCG CAATGGTGTT GTGCTGGCAC
TGCGACAACC AACTGCGTGA CCAGACATCG GAATCACTGG AGCTGCTTGC TCAACAAAAT
CTGACAGCAT GGGTGATTGA CGTCATCCGT CACGCAATAA GCGGTACGCA GGAGCGGGAA
TTATCTTTGG CTGAATTATC CTGGTGGGCG GTCTGCAATC AGGTGGTGGA TGCACTACCT
GAGGCTGTAT CGCGTCGTTC GCTGGGATTA CCAGCGGAAA AAATCTGCTC GGTGTACCGC
GAAAGCGACA TCGTACCGGG AGAGCAGACC GCCACCAGCA TATTGAAACA ACGCACAAAA
AATCTTGCAC CGTTGCCTTA CGCCCACCAG CAACAAAAAT CACCACAGGA AAAGACGGTG
GTAAGCATCA CCGTTGATCC AGAGTCTCCG GAATCTTTCA TGAAGCTGCC TAAACGTCGC
CGCTGGGTTA AGGAGAAATA CACACGTTGG GTTAAGACAC AGCCGTGTGC TTGCTGCGGT
ATGCCAGCCG ACGATCCGCA TCATCTGATT GGTCACGGGC AGGGCGGAAT GGGAACAAAA
GCACATGATC TCTTTGTGTT GCCTTTGTGC AGAAAGCATC ACAACGAGCT GCATACGGAT
ACAGTGGCAT TTGAAGATAA GTATGGCTCC CAACTGGAGC TGATATTTCG TTTTATCGAT
CGCGCGCTGG CAATTGGCGT ACTGGCGTAA
 
Protein sequence
MRVLLRPVLV PELGLVVLKP GRESIQIFHN PRVLVEPEPK SMRNLPSGVV PAVRQPLAED 
KTLLPFFSNE RVIRAAGGVG ALSDWLLRHV TSCQWPNGDY HHTETVIHRY GTGAMVLCWH
CDNQLRDQTS ESLELLAQQN LTAWVIDVIR HAISGTQERE LSLAELSWWA VCNQVVDALP
EAVSRRSLGL PAEKICSVYR ESDIVPGEQT ATSILKQRTK NLAPLPYAHQ QQKSPQEKTV
VSITVDPESP ESFMKLPKRR RWVKEKYTRW VKTQPCACCG MPADDPHHLI GHGQGGMGTK
AHDLFVLPLC RKHHNELHTD TVAFEDKYGS QLELIFRFID RALAIGVLA