| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcDH1_2055 |
|---|
| Symbol | |
|---|
| ID | 0 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli DH1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | CP001637 |
|---|
| Strand | - |
|---|
| Start bp | 2215499 |
|---|
| End bp | 2217895 |
|---|
| Gene Length | 2397 bp |
|---|
| Protein Length | 798 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | |
|---|
| Product | anaerobic dimethyl sulfoxide reductase, A subunit, DmsA/YnfE family |
|---|
| Protein accession | ACX39712 |
|---|
| Protein GI | 260449290 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGGCTG AAATCAGCCG TAGAAGTCTG ATGAAAACCT CCGCACTTGG CAGTCTTGCG
CTGGCAAGCA GTGCTTTCAC TCTGCCATTT TCCCAAATGG TCCGGGCGGC AGAGGCTCCG
GTAGAAGAGA AAGCGGTCTG GAGTTCCTGC ACCGTTAACT GCGGGAGCCG CTGTCTGTTA
CGTTTGCATG TGAAAGATGA CACCGTGTAC TGGGTGGAGT CTGATACGAC AGGTGACGAC
GTCTACGGTA ATCATCAGGT TCGAGCGTGT TTACGCGGGC GCTCTATCCG CCGACGGATG
AATCATCCTG ATAGGTTGAA ATATCCCATG AAGCGCGTCG GCAAGCGCGG TGAAGGTAAA
TTTGAACGGA TAAGTTGGGA CGAAGCCCTG GATACCATCA GTGATAATCT TCGGCGGATC
CTGAAAGATT ACGGCAATGA GGCTGTACAT GTCCTGTACG GAACAGGCGT AGATGGCGGA
AACATCACCA ACTCAAACGT CCCGTACCGT CTGATGAACT CTTGCGGTGG TTTTCTCAGT
CGCTATGGCA GCTACAGTAC CGCACAGATC AGTGCCGCAA TGAGTTATAT GTTCGGTGCC
AATGATGGCA ACAGCCCGGA TGATATCGCC AATACGAAAC TGGTCGTTAT GTTCGGAAAT
AACCCGGCAG AAACGCGGAT GAGCGGCGGT GGTGTCACTT ACTACGTCGA GCAAGCCCGC
GAACGTTCAA ACGCACGCAT GATCGTCATC GATCCACGTT ATAACGACAC TGCTGCCGGG
CGTGAAGATG AATGGCTGCC CATTCGCCCT GGCACCGATG GCGCACTGGC CTGTGCGATT
GCCTGGGTAC TGATTACTGA AAACATGGTC GATCAGCCAT TTCTCGACAA ATATTGTGTT
GGTTACGATG AAAAAACGCT GCCCGCCAAC GCACCACGTA ACGCGCATTA TAAAGCCTAT
ATTCTGGGCG AAGGGCCTGA CGGCATAGCT AAAACGCCGG AATGGGCAGC AAAAATCACC
AGCATCCCGG CAGAAAAAAT TATCCAGTTG GCACGAGAGA TCGGTTCAGC AAAACCTGCT
TATATTTGTC AGGGTTGGGG GCCACAACGA CATTCCAACG GCGAGCAAAC ATCCCGCGCT
ATTGCCATGC TTTCCGTTCT CACCGGCAAC GTCGGCATAA ACGGCGGCAA CTCAGGCGTA
CGCGAAGGTA GCTGGGATCT GGGGGTAGAA TGGTTCCCGA TGCTCGAGAA TCCTGTTAAA
ACGCAGATTT CCGTCTTTAC ATGGACAGAT GCCATCGACC ATGGTACGGA AATGACCGCG
ACCCGTGATG GTGTTCGTGG AAAAGAAAAA CTGGATGTCC CCATCAAGTT TTTATGGTGC
TACGCCAGTA ACACATTGAT CAATCAACAT GGCGACATCA ATCACACCCA TGAGGTGCTT
CAGGATGACA GCAAGTGCGA GATGATTGTT GGCATTGACC ACTTCATGAC GGCCTCGGCT
AAGTATTGCG ATATCCTGTT GCCCGACCTG ATGCCAACAG AGCAAGAAGA CCTTATCTCT
CATGAATCTG CAGGGAATAT GGGCTATGTG ATCCTCGCCC AACCCGCAAC CTCAGCAAAA
TTTGAACGCA AACCCATCTA CTGGATGCTG AGTGAAGTCG CCAAACGCTT AGGACCAGAC
GTTTATCAAA CCTTTACTGA AGGTCGCAGT CAGCATGAAT GGATCAAATA TCTCCATGCG
AAAACGAAGG AACGTAACCC TGAGATGCCC GACTACGAGG AGATGAAAAC GACCGGGATC
TTTAAGAAAA AATGCCCGGA AGAACACTAC GTCGCTTTCC GCGCATTCCG TGAAGATCCA
CAGGCAAACC CGTTGAAAAC ACCTTCGGGG AAAATCGAAA TTTATTCTGA ACGACTGGCG
AAGATTGCAG ATACCTGGGA ATTGAAAAAA GATGAAATTA TTCATCCCCT TCCTGCGTAT
ACCCCAGGTT TTGATGGCTG GGACGATCCC CTGCGGAAAA CCTATCCACT GCAGTTAACG
GGCTTCCATT ACAAAGCGCG TACCCACTCC AGCTACGGCA ATATTGATGT GTTACAGCAG
GCCTGCCCAC AAGAGGTGTG GATCAACCCC ATTGATGCTC AGGCACGCGG TATCCGTCAT
GGCGATACCG TGCGGGTATT TAACAATAAT GGAGAAATGC TGATTGCCGC AAAAGTGACT
CCGCGTATTC TGCCTGGCGT TACCGCCATC GGGCAAGGTG CGTGGCTTAA AGCGGATATG
TTTGGTGACC GGGTCGATCA CGGCGGCAGT ATCAATATTC TGACCTCTCA CCGCCCTTCA
CCGCTGGCAA AGGGAAACCC GTCGCACAGC AATCTTGTCC AGATCGAAAA GGTTTAA
|
|---|
| Protein sequence | MKAEISRRSL MKTSALGSLA LASSAFTLPF SQMVRAAEAP VEEKAVWSSC TVNCGSRCLL
RLHVKDDTVY WVESDTTGDD VYGNHQVRAC LRGRSIRRRM NHPDRLKYPM KRVGKRGEGK
FERISWDEAL DTISDNLRRI LKDYGNEAVH VLYGTGVDGG NITNSNVPYR LMNSCGGFLS
RYGSYSTAQI SAAMSYMFGA NDGNSPDDIA NTKLVVMFGN NPAETRMSGG GVTYYVEQAR
ERSNARMIVI DPRYNDTAAG REDEWLPIRP GTDGALACAI AWVLITENMV DQPFLDKYCV
GYDEKTLPAN APRNAHYKAY ILGEGPDGIA KTPEWAAKIT SIPAEKIIQL AREIGSAKPA
YICQGWGPQR HSNGEQTSRA IAMLSVLTGN VGINGGNSGV REGSWDLGVE WFPMLENPVK
TQISVFTWTD AIDHGTEMTA TRDGVRGKEK LDVPIKFLWC YASNTLINQH GDINHTHEVL
QDDSKCEMIV GIDHFMTASA KYCDILLPDL MPTEQEDLIS HESAGNMGYV ILAQPATSAK
FERKPIYWML SEVAKRLGPD VYQTFTEGRS QHEWIKYLHA KTKERNPEMP DYEEMKTTGI
FKKKCPEEHY VAFRAFREDP QANPLKTPSG KIEIYSERLA KIADTWELKK DEIIHPLPAY
TPGFDGWDDP LRKTYPLQLT GFHYKARTHS SYGNIDVLQQ ACPQEVWINP IDAQARGIRH
GDTVRVFNNN GEMLIAAKVT PRILPGVTAI GQGAWLKADM FGDRVDHGGS INILTSHRPS
PLAKGNPSHS NLVQIEKV
|
|---|
| |