Gene EcDH1_2018 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcDH1_2018 
Symbol 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli DH1 
KingdomBacteria 
Replicon accessionCP001637 
Strand
Start bp2174170 
End bp2175210 
Gene Length1041 bp 
Protein Length346 aa 
Translation table11 
GC content53% 
IMG OID 
Productoxidoreductase domain protein 
Protein accessionACX39675 
Protein GI260449253 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.0210175 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCGACA ACATCCGTGT TGGGTTGATT GGGTATGGTT ATGCGAGCAA AACCTTCCAT 
GCGCCCCTGA TTGCGGGCAC GCCCGGGCAG GAACTGGCGG TAATCTCCAG CAGTGATGAA
ACAAAAGTAA AAGCCGACTG GCCAACGGTT ACGGTTGTCT CTGAGCCGAA GCATCTGTTT
AACGATCCCA ACATAGACCT GATTGTCATT CCTACACCCA ACGATACCCA TTTCCCGTTA
GCCAAAGCGG CGCTTGAGGC GGGTAAACAT GTGGTCGTTG ATAAACCCTT TACCGTGACA
CTGTCACAAG CGCGAGAGCT GGATGCGCTG GCAAAAAGCC TGGGGCGTGT GCTGTCTGTA
TTCCATAACC GTCGCTGGGA TAGCGATTTC TTGACGCTAA AAGGTTTACT CGCGGAAGGC
GTGCTGGGTG AAGTTGCTTA CTTTGAGTCT CATTTTGACC GCTTCCGTCC GCAGGTGCGC
GATCGTTGGC GTGAACAGGG CGGCCCAGGC AGCGGTATCT GGTACGATTT AGCACCACAT
CTTCTTGATC AGGCCATTAC GCTTTTTGGT TTACCGGTCA GCATGACGGT AGATTTGGCA
CAGTTACGGC CCGGAGCGCA GTCGACCGAT TATTTCCACG CCATCTTGTC CTATCCACAG
CGGCGAGTCA TTTTACACGG TACCATGCTG GCAGCCGCTG AGTCAGCACG GTATATCGTG
CATGGATCCC GAGGCAGTTA TGTGAAATAT GGCCTCGATC CACAGGAAGA ACGTCTGAAA
AATGGCGAGC GTCTACCGCA GGAAGACTGG GGCTACGATA TGCGTGATGG CGTACTTACC
CGCGTGGAAG GTGAGGAACG TGTCGAAGAA ACGCTGTTGA CGGTGCCTGG GAATTATCCG
GCTTACTATG CGGCTATTCG TGATGCGTTA AATGGCGATG GTGAAAATCC GGTTCCGGCA
AGCCAGGCAA TCCAGGTAAT GGAGTTGATT GAGCTGGGCA TCGAATCCGC CAAACATCGC
GCGACTTTGT GCCTTGCATG A
 
Protein sequence
MSDNIRVGLI GYGYASKTFH APLIAGTPGQ ELAVISSSDE TKVKADWPTV TVVSEPKHLF 
NDPNIDLIVI PTPNDTHFPL AKAALEAGKH VVVDKPFTVT LSQARELDAL AKSLGRVLSV
FHNRRWDSDF LTLKGLLAEG VLGEVAYFES HFDRFRPQVR DRWREQGGPG SGIWYDLAPH
LLDQAITLFG LPVSMTVDLA QLRPGAQSTD YFHAILSYPQ RRVILHGTML AAAESARYIV
HGSRGSYVKY GLDPQEERLK NGERLPQEDW GYDMRDGVLT RVEGEERVEE TLLTVPGNYP
AYYAAIRDAL NGDGENPVPA SQAIQVMELI ELGIESAKHR ATLCLA