Gene EcDH1_2015 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcDH1_2015 
Symbol 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli DH1 
KingdomBacteria 
Replicon accessionCP001637 
Strand
Start bp2172788 
End bp2173228 
Gene Length441 bp 
Protein Length146 aa 
Translation table11 
GC content49% 
IMG OID 
Productconserved hypothetical protein 
Protein accessionACX39672 
Protein GI260449250 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value7.26557e-06 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCACCA CAACGCCACA ACGTATTGGA GGCTGGTTGC TTGGCCCGTT GGCCTGGCTT 
TTAGTCGCTC TGTTGAGTAC GACGCTGGCG TTGTTGCTGT ATACCGCTGC GTTATCTTCT
CCGCAAACAT TTCAAACGCT CGGCGGACAA GCACTGACGA CACAAATCTT ATGGGGCGTT
TCTTTTATTA CCGCTATCGC CTTGTGGTAT TACACACTGT GGTTGACCAT CGCTTTCTTT
AAACGTCGGC GTTGTGTTCC TAAACACTAT ATTATCTGGC TGCTTATTTC CGTATTGCTG
GCAGTAAAAG CATTCGCTTT TTCACCCGTG GAAGATGGCA TAGCCGTTCG CCAGTTGCTG
TTTACTTTGT TGGCAACCGC ATTGATCGTC CCCTATTTCA AACGCTCGTC GCGGGTAAAA
GCGACGTTTG TGAATCCGTA A
 
Protein sequence
MTTTTPQRIG GWLLGPLAWL LVALLSTTLA LLLYTAALSS PQTFQTLGGQ ALTTQILWGV 
SFITAIALWY YTLWLTIAFF KRRRCVPKHY IIWLLISVLL AVKAFAFSPV EDGIAVRQLL
FTLLATALIV PYFKRSSRVK ATFVNP