Gene EcDH1_2009 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcDH1_2009 
Symbol 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli DH1 
KingdomBacteria 
Replicon accessionCP001637 
Strand
Start bp2166955 
End bp2167650 
Gene Length696 bp 
Protein Length231 aa 
Translation table11 
GC content53% 
IMG OID 
Productelectron transport complex, RnfABCDGE type, E subunit 
Protein accessionACX39666 
Protein GI260449244 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.00206921 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAGCGAAA TTAAAGACGT TATTGTTCAG GGGTTGTGGA AAAACAACTC TGCGCTGGTC 
CAGTTGCTCG GCCTTTGTCC TCTGTTGGCG GTCACGTCCA CTGCCACTAA CGCTCTGGGT
TTAGGACTTG CGACTACGCT GGTACTGACG CTGACCAACC TGACCATTTC GACGCTGCGT
CACTGGACGC CAGCCGAGAT CCGCATTCCC ATTTACGTGA TGATCATCGC CTCGGTGGTC
AGCGCTGTAC AGATGCTGAT CAACGCCTAC GCCTTTGGCC TGTATCAATC ATTAGGGATT
TTTATTCCGC TGATTGTCAC TAACTGTATC GTTGTGGGCC GCGCTGAAGC CTTCGCCGCC
AAAAAAGGTC CGGCGCTTTC GGCACTGGAC GGCTTTTCAA TTGGTATGGG CGCAACCTGC
GCCATGTTCG TGCTGGGTTC ACTACGCGAA ATTATCGGCA ATGGCACATT GTTTGACGGT
GCAGATGCGC TGTTAGGTAG CTGGGCAAAA GTATTACGCG TGGAGATTTT CCACACCGAC
TCCCCTTTCC TGCTGGCGAT GCTGCCACCA GGTGCATTTA TTGGCCTGGG ACTGATGCTG
GCAGGAAAAT ACCTGATTGA TGAAAGAATG AAAAAGCGCC GTGCTGAAGC AGCTGCAGAA
CGTGCATTGC CAAACGGTGA AACAGGGAAT GTCTGA
 
Protein sequence
MSEIKDVIVQ GLWKNNSALV QLLGLCPLLA VTSTATNALG LGLATTLVLT LTNLTISTLR 
HWTPAEIRIP IYVMIIASVV SAVQMLINAY AFGLYQSLGI FIPLIVTNCI VVGRAEAFAA
KKGPALSALD GFSIGMGATC AMFVLGSLRE IIGNGTLFDG ADALLGSWAK VLRVEIFHTD
SPFLLAMLPP GAFIGLGLML AGKYLIDERM KKRRAEAAAE RALPNGETGN V