Gene EcDH1_2004 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcDH1_2004 
Symbol 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli DH1 
KingdomBacteria 
Replicon accessionCP001637 
Strand
Start bp2162592 
End bp2163452 
Gene Length861 bp 
Protein Length286 aa 
Translation table11 
GC content53% 
IMG OID 
Productpyridoxal kinase 
Protein accessionACX39661 
Protein GI260449239 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.00305997 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAATA TTCTCGCTAT CCAGTCTCAC GTTGTTTATG GTCATGCGGG TAACAGTGCG 
GCAGAGTTTC CGATGCGCCG CCTGGGCGCG AACGTCTGGC CGCTGAACAC CGTTCAATTT
TCTAATCACA CCCAATACGG CAAATGGACT GGCTGCGTGA TGCCGCCCAG CCATTTAACC
GAAATTGTGC AAGGCATTGC CGCCATTGAT AAATTACACA CCTGTGATGC CGTATTAAGT
GGCTATCTGG GATCGGCGGA GCAGGGTGAA CATATCCTCG GTATCGTCCG TCAGGTGAAA
GCCGCGAATC CGCAGGCGAA ATATTTTTGC GATCCGGTAA TGGGTCATCC GGAAAAAGGC
TGTATCGTTG CACCGGGTGT CGCAGAGTTT CATGTGCGGC ACGGTTTGCC TGCCAGCGAT
ATCATTGCGC CAAATCTGGT TGAGCTGGAA ATACTCTGTG AGCATGCGGT AAATAACGTC
GAAGAAGCGG TTCTGGCAGC GCGCGAACTC ATTGCGCAAG GGCCACAAAT TGTGTTGGTT
AAACACCTGG CGCGAGCTGG CTACAGCCGT GACCGTTTTG AAATGCTGCT GGTCACCGCC
GATGAAGCCT GGCATATCAG CCGTCCGCTG GTGGATTTTG GTATGCGCCA GCCGGTAGGT
GTTGGTGATG TGACGAGCGG TTTACTGCTG GTGAAACTGC TTCAGGGGGC AACGCTGCAG
GAGGCGCTGG AACATGTGAC CGCTGCAGTC TACGAAATCA TGGTGACCAC CAAAGCAATG
CAGGAATATG AGCTGCAAGT GGTGGCTGCT CAGGATCGTA TTGCCAAACC AGAACATTAC
TTCAGCGCAA CAAAGCTCTG A
 
Protein sequence
MKNILAIQSH VVYGHAGNSA AEFPMRRLGA NVWPLNTVQF SNHTQYGKWT GCVMPPSHLT 
EIVQGIAAID KLHTCDAVLS GYLGSAEQGE HILGIVRQVK AANPQAKYFC DPVMGHPEKG
CIVAPGVAEF HVRHGLPASD IIAPNLVELE ILCEHAVNNV EEAVLAAREL IAQGPQIVLV
KHLARAGYSR DRFEMLLVTA DEAWHISRPL VDFGMRQPVG VGDVTSGLLL VKLLQGATLQ
EALEHVTAAV YEIMVTTKAM QEYELQVVAA QDRIAKPEHY FSATKL