Gene EcDH1_1999 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcDH1_1999 
Symbol 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli DH1 
KingdomBacteria 
Replicon accessionCP001637 
Strand
Start bp2158135 
End bp2158602 
Gene Length468 bp 
Protein Length155 aa 
Translation table11 
GC content51% 
IMG OID 
Product17 kDa surface antigen 
Protein accessionACX39656 
Protein GI260449234 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.00005432 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTAAAC GCGTATTGGT TGTTTCAATG GTAGGTCTGT CTCTTGTCGG TTGTGTTAAT 
AACGACACCC TGTCAGGGGA TGTTTATACC GCTTCTGAAG CGAAACAAGT ACAGAATGTC
AGCTATGGCA CCATCGTTAA CGTACGTCCG GTACAGATTC AGGGCGGTGA TGATTCCAAC
GTTATCGGTG CAATTGGCGG TGCTGTTCTT GGTGGTTTCC TGGGGAATAC TGTTGGTGGC
GGAACCGGGC GTTCTCTGGC TACTGCAGCA GGCGCTGTTG CAGGTGGCGT AGCTGGTCAG
GGCGTACAGA GTGCAATGAA CAAAACGCAG GGTGTCGAGC TGGAAATTCG TAAAGACGAT
GGTAATACCA TCATGGTGGT ACAGAAACAA GGCAACACTC GTTTCTCTCC GGGCCAACGT
GTCGTACTGG CCAGCAATGG CAGTCAGGTG ACCGTTTCTC CGCGCTAA
 
Protein sequence
MIKRVLVVSM VGLSLVGCVN NDTLSGDVYT ASEAKQVQNV SYGTIVNVRP VQIQGGDDSN 
VIGAIGGAVL GGFLGNTVGG GTGRSLATAA GAVAGGVAGQ GVQSAMNKTQ GVELEIRKDD
GNTIMVVQKQ GNTRFSPGQR VVLASNGSQV TVSPR