Gene EcDH1_1985 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcDH1_1985 
Symbol 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli DH1 
KingdomBacteria 
Replicon accessionCP001637 
Strand
Start bp2143228 
End bp2144043 
Gene Length816 bp 
Protein Length271 aa 
Translation table11 
GC content48% 
IMG OID 
ProductNLP/P60 protein 
Protein accessionACX39642 
Protein GI260449220 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value0.778309 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGCGCGGA TAAACCGTAT TTCGATCACG CTCTGTGCTT TACTTTTTAC CACCCTGCCT 
TTAACGCCTA TGGCCCATGC TTCAAAGCAA GCCAGGGAGA GTTCTGCTAC CACTCATATC
ACCAAAAAAG CAGATAAAAA GAAAAGCACG GCAACCACCA AAAAGACCCA GAAAACAGCG
AAAAAAGCCG CCAGTAAAAG TACGACCAAA AGCAAAACCG CTTCTTCCGT TAAAAAATCT
TCCATTACCG CTTCTAAAAA CGCCAAAACT CGCAGCAAAC ACGCCGTCAA TAAAACGGCC
TCAGCCAGCT TTACCGAAAA GTGTACCAAA CGTAAGGGCT ATAAATCGCA TTGTGTGAAA
GTCAAAAATG CCGCGTCAGG AACTCTTGCC GACGCGCACA AAGCGAAGGT GCAAAAAGCT
ACGAAAGTGG CAATGAATAA ACTGATGCAG CAAATTGGTA AGCCATATCG TTGGGGTGGC
AGCTCACCGC GTACCGGTTT TGATTGCAGC GGCCTGGTTT ATTACGCTTA TAAAGATTTG
GTGAAAATTC GTATTCCGCG TACGGCGAAT GAAATGTATC ACCTGCGTGA TGCAGCGCCA
ATCGAACGTA GTGAACTGAA AAACGGCGAC CTGGTCTTTT TCCGTACTCA GGGACGCGGC
ACAGCCGATC ATGTCGGCGT GTATGTCGGC AACGGCAAAT TTATTCAGTC ACCGCGCACA
GGTCAGGAAA TTCAAATCAC TTCTCTCAGT GAAGACTACT GGCAGCGCCA CTATGTTGGC
GCTCGTCGGG TAATGACCCC AAAAACACTT CGCTAA
 
Protein sequence
MARINRISIT LCALLFTTLP LTPMAHASKQ ARESSATTHI TKKADKKKST ATTKKTQKTA 
KKAASKSTTK SKTASSVKKS SITASKNAKT RSKHAVNKTA SASFTEKCTK RKGYKSHCVK
VKNAASGTLA DAHKAKVQKA TKVAMNKLMQ QIGKPYRWGG SSPRTGFDCS GLVYYAYKDL
VKIRIPRTAN EMYHLRDAAP IERSELKNGD LVFFRTQGRG TADHVGVYVG NGKFIQSPRT
GQEIQITSLS EDYWQRHYVG ARRVMTPKTL R