Gene EcDH1_1981 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcDH1_1981 
Symbol 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli DH1 
KingdomBacteria 
Replicon accessionCP001637 
Strand
Start bp2138680 
End bp2139612 
Gene Length933 bp 
Protein Length310 aa 
Translation table11 
GC content54% 
IMG OID 
Producttranscriptional regulator, LysR family 
Protein accessionACX39638 
Protein GI260449216 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.0211001 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTGGTCAG AATATTCACT CGAAGTTGTT GATGCGGTAG CGCGTAATGG TAGTTTTAGC 
GCTGCGGCAC AGGAGCTGCA TCGCGTTCCT TCTGCGGTCA GCTATACCGT GCGTCAGCTG
GAAGAGTGGC TGGCGGTGCC GCTCTTTGAA CGACGGCACC GTGATGTGGA GCTGACCGCT
GCTGGAGCGT GGTTTCTCAA AGAAGGGCGC TCTGTTGTCA AAAAAATGCA GATCACCCGC
CAGCAATGTC AGCAGATAGC GAACGGCTGG CGCGGTCAGT TAGCTATCGC AGTGGATAAT
ATTGTCAGGC CAGAACGTAC ACGGCAGATG ATCGTTGATT TTTATCGCCA TTTTGATGAT
GTCGAACTTC TTGTCTTTCA GGAAGTGTTC AACGGTGTCT GGGATGCGCT TTCCGACGGG
CGCGTGGAAC TGGCGATTGG CGCAACACGC GCGATTCCGG TAGGCGGTCG TTATGCCTTC
CGGGATATGG GGATGCTAAG CTGGAGTTGC GTTGTTGCCA GTCACCACCC GCTGGCGTTG
ATGGATGGCC CGTTCAGCGA TGATACGTTG CGCAACTGGC CGTCGTTGGT GCGCGAAGAC
ACCTCGCGAA CGCTACCTAA ACGTATTACC TGGTTGCTGG ATAACCAAAA AAGAGTTGTC
GTGCCTGACT GGGAATCATC GGCAACCTGT ATCTCGGCAG GATTATGCAT AGGGATGGTG
CCAACACATT TCGCCAAACC GTGGCTTAAT GAGGGGAAGT GGGTAGCATT AGAACTGGAA
AACCCCTTTC CGGATTCGGC ATGTTGTCTG ACATGGCAGC AAAATGATAT GTCGCCTGCG
TTAACCTGGT TGCTTGAGTA TCTCGGCGAT AGTGAGACGC TGAATAAGGA GTGGCTGCGG
GAGCCGGAAG AGACTCCCGC AACGGGTGAT TAA
 
Protein sequence
MWSEYSLEVV DAVARNGSFS AAAQELHRVP SAVSYTVRQL EEWLAVPLFE RRHRDVELTA 
AGAWFLKEGR SVVKKMQITR QQCQQIANGW RGQLAIAVDN IVRPERTRQM IVDFYRHFDD
VELLVFQEVF NGVWDALSDG RVELAIGATR AIPVGGRYAF RDMGMLSWSC VVASHHPLAL
MDGPFSDDTL RNWPSLVRED TSRTLPKRIT WLLDNQKRVV VPDWESSATC ISAGLCIGMV
PTHFAKPWLN EGKWVALELE NPFPDSACCL TWQQNDMSPA LTWLLEYLGD SETLNKEWLR
EPEETPATGD