Gene EcDH1_1946 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcDH1_1946 
Symbol 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli DH1 
KingdomBacteria 
Replicon accessionCP001637 
Strand
Start bp2099177 
End bp2100088 
Gene Length912 bp 
Protein Length303 aa 
Translation table11 
GC content42% 
IMG OID 
Producttranscriptional regulator, AraC family 
Protein accessionACX39603 
Protein GI260449181 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.192766 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTATCAAC GCTGTTTTGA TAACGCCAGT GAAACGCTGT TTGTCGCCGG TAAAACGCCA 
CGGCTTTCAC GTTTTGCATT TAGCGATGAT CCAAAATGGG AGTCCGGACA TCACGTTCAT
GACAATGAAA CCGAGTTGAT TTACGTCAAG AAAGGGGTTG CAAGGTTTAC CATCGATTCT
TCGTTATATG TCGCACATGC GGATGACATT GTGGTGATAG AACGCGGCAG GCTGCATGCG
GTGGCCTCTG ACGTTAACGA TCCGGCAACG ACGTGTACCT GTGCGCTGTA CGGCTTTCAG
TTTCAGGGGG CTGAGGAAAA TCAGCTACTG CAACCGCATT CTTGTCCGGT AATTGCCGCG
GGGCAGGGAA AAGAAGTCAT AAAAACCTTA TTTAATGAGC TAAGTGTGAT TTTGCCGCAA
AGTAAAAATA GCCAAACATC TTCGTTATGG GATGCATTTG CCTATACGTT AGCCATTCTT
TACTACGAAA ATTTTAAAAA TGCTTATCGT TCGGAGCAGG GGTATATTAA AAAAGATGTT
CTGATAAAAG ATATTCTTTT CTATCTGAAT AATAATTATC GCGAAAAAAT CACTTTAGAA
CAGTTATCGA AAAAATTTCG TGCCAGCGTC AGTTATATTT GCCATGAATT TACCAAAGAG
TATCGTATTT CCCCTATTAA CTATGTTATT CAACGGCGTA TGACGGAAGC AAAATGGTCA
CTCACTAATA CTGAATTATC ACAGGCAGAG ATCTCCTGGC GTGTGGGTTA TGAAAATGTC
GATCACTTTG CCAAACTGTT TTTGCGCCAT GTCGGTTGTT CGCCCAGCGA TTACCGTAGA
CAATTTAAAA ACTGTTTTGC GGAACAAGAA ATCCTATCTG AATTTCCTCA ACCGGTAAGT
CTTGTTGGAT AA
 
Protein sequence
MYQRCFDNAS ETLFVAGKTP RLSRFAFSDD PKWESGHHVH DNETELIYVK KGVARFTIDS 
SLYVAHADDI VVIERGRLHA VASDVNDPAT TCTCALYGFQ FQGAEENQLL QPHSCPVIAA
GQGKEVIKTL FNELSVILPQ SKNSQTSSLW DAFAYTLAIL YYENFKNAYR SEQGYIKKDV
LIKDILFYLN NNYREKITLE QLSKKFRASV SYICHEFTKE YRISPINYVI QRRMTEAKWS
LTNTELSQAE ISWRVGYENV DHFAKLFLRH VGCSPSDYRR QFKNCFAEQE ILSEFPQPVS
LVG