Gene EcDH1_1936 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcDH1_1936 
Symbol 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli DH1 
KingdomBacteria 
Replicon accessionCP001637 
Strand
Start bp2087234 
End bp2088670 
Gene Length1437 bp 
Protein Length478 aa 
Translation table11 
GC content53% 
IMG OID 
Productprotein of unknown function UPF0061 
Protein accessionACX39593 
Protein GI260449171 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCCTGT CTTTTGTTAC CCGCTGGCGC GATGAATTGC CAGAAACCTA TACAGCACTT 
TCCCCTACGC CTTTAAATAA TGCCCGGCTG ATTTGGCATA ATACCGAACT GGCTAACACG
CTGAGTATTC CATCGTCGCT GTTTAAAAAT GGCGCAGGTG TCTGGGGCGG CGAAGCCCTA
CTGCCTGGTA TGTCACCACT GGCGCAGGTT TACAGTGGTC ATCAGTTCGG CGTCTGGGCG
GGCCAACTGG GTGATGGGCG CGGCATTTTA CTCGGCGAAC AACTGCTTGC TGATGGCACT
ACAATGGACT GGCATCTGAA AGGTGCTGGC CTGACGCCTT ATTCGCGAAT GGGTGATGGA
CGGGCGGTTT TACGTTCGAC GATACGAGAA AGTCTCGCCA GTGAGGCGAT GCATTATCTG
GGCATTCCGA CGACCCGCGC GTTAAGTATC GTCACCAGCG ATTCGCCAGT GTATCGGGAA
ACGGCGGAGC CAGGCGCGAT GCTGATGCGT GTGGCACCAA GTCATCTGCG CTTTGGTCAT
TTCGAACATT TTTACTACCG CCGCGAGTCG GAAAAGGTTC GTCAGTTAGC TGACTTTGCT
ATTCGTCATT ACTGGTCACA TCTTGCAGAT GATGAGGACA AATACCGTCT CTGGTTTAGC
GATGTTGTCG CACGTACCGC GTCGTTAATT GCCCAATGGC AGACGGTCGG CTTTGCTCAT
GGGGTGATGA ATACCGACAA CATGTCGCTG CTGGGGCTGA CGCTTGATTA CGGGCCGTTT
GGTTTTCTTG ATGATTACGA ACCCGGTTTT ATTTGTAATC ACTCGGATCA TCAAGGGCGT
TACAGCTTTG ATAATCAACC TGCCGTCGCG TTGTGGAATT TACAGCGTCT GGCGCAGACA
TTGTCGCCAT TTGTTGCCGT AGATGCCCTG AATGAGGCCC TGGACAGCTA TCAGCAGGTT
TTGTTGACGC ATTATGGAGA ACGGATGCGG CAGAAACTGG GCTTCATGAC GGAGCAAAAA
GAGGATAACG CGCTACTGAA TGAATTATTC AGTCTGATGG CGCGAGAGCG CAGCGATTAT
ACCCGCACAT TCCGCATGCT GAGTCTGACC GAGCAGCACA GCGCGGCGTC ACCGCTACGT
GATGAGTTTA TTGATCGTGC GGCATTTGAT GACTGGTTTG CCCGTTATCG GGGGCGTTTG
CAACAAGACG AGGTTAGCGA TAGTGAGCGT CAGCAACTGA TGCAAAGCGT TAACCCCGCT
CTGGTATTGC GCAACTGGTT GGCGCAACGG GCGATTGAAG CGGCAGAAAA GGGTGATATG
ACGGAATTGC ACCGCCTGCA TGAGGCGTTG CGAAATCCTT TCAGCGACAG AGATGATGAC
TATGTCAGTC GTCCACCTGA CTGGGGTAAA CGGCTGGAAG TCAGCTGCTC GAGTTAA
 
Protein sequence
MTLSFVTRWR DELPETYTAL SPTPLNNARL IWHNTELANT LSIPSSLFKN GAGVWGGEAL 
LPGMSPLAQV YSGHQFGVWA GQLGDGRGIL LGEQLLADGT TMDWHLKGAG LTPYSRMGDG
RAVLRSTIRE SLASEAMHYL GIPTTRALSI VTSDSPVYRE TAEPGAMLMR VAPSHLRFGH
FEHFYYRRES EKVRQLADFA IRHYWSHLAD DEDKYRLWFS DVVARTASLI AQWQTVGFAH
GVMNTDNMSL LGLTLDYGPF GFLDDYEPGF ICNHSDHQGR YSFDNQPAVA LWNLQRLAQT
LSPFVAVDAL NEALDSYQQV LLTHYGERMR QKLGFMTEQK EDNALLNELF SLMARERSDY
TRTFRMLSLT EQHSAASPLR DEFIDRAAFD DWFARYRGRL QQDEVSDSER QQLMQSVNPA
LVLRNWLAQR AIEAAEKGDM TELHRLHEAL RNPFSDRDDD YVSRPPDWGK RLEVSCSS