Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcDH1_1908 |
Symbol | |
ID | 0 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli DH1 |
Kingdom | Bacteria |
Replicon accession | CP001637 |
Strand | + |
Start bp | 2059978 |
End bp | 2061330 |
Gene Length | 1353 bp |
Protein Length | 450 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | |
Product | glycoside hydrolase family 4 |
Protein accession | ACX39566 |
Protein GI | 260449144 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.12949 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCCAGA AATTAAAAGT CGTCACTATT GGTGGCGGGA GCAGCTATAC CCCGGAGTTA CTGGAAGGAT TTATTAAGCG TTATCACGAA TTGCCGGTCA GCGAATTATG GCTGGTGGAT GTCGAAGGTG GTAAACCGAA ACTGGATATT ATTTTCGATC TCTGCCAACG GATGATTGAT AACGCTGGCG TCCCGATGAA GCTTTATAAA ACGCTGGATC GCCGCGAAGC ATTGAAAGAT GCTGATTTCG TTACTACCCA ACTGCGCGTT GGCCAATTAC CGGCGCGTGA ACTGGATGAA CGTATTCCAT TAAGTCATGG TTATCTTGGT CAGGAAACCA ACGGCGCGGG CGGTTTGTTT AAAGGTCTGC GTACCATTCC GGTGATTTTT GACATCGTAA AAGATGTCGA AGAACTTTGT CCGAATGCAT GGGTGATTAA CTTCACTAAC CCGGCGGGAA TGGTCACTGA AGCCGTTTAT CGTCATACCG GATTTAAACG CTTTATCGGC GTGTGTAATA TTCCGATCGG CATGAAGATG TTTATTCGCG ATGTTCTGAT GCTGAAAGAC AGCGATGATT TATCTATCGA TTTGTTCGGC CTCAACCATA TGGTGTTCAT TAAGGATGTG CTGATAAATG GCAAGTCGCG CTTTGCCGAA TTGCTTGATG GTGTGGCGTC AGGGCAGTTA AAAGCGTCCT CTGTAAAAAA TATTTTCGAT CTGCCATTTA GTGAGGGCTT AATTCGTTCG TTGAATCTGC TGCCATGTTC TTATCTGCTG TATTACTTCA AGCAGAAAGA GATGCTGGCT ATTGAAATGG GCGAATACTA CAAAGGCGGC GCACGAGCGC AGGTAGTACA GAAAGTCGAG AAACAACTTT TTGAGCTGTA TAAAAATCCT GAGCTGAAAG TTAAGCCGAA AGAACTGGAA CAGCGCGGTG GGGCTTATTA CTCTGATGCA GCATGCGAAG TGATCAACGC TATCTACAAC GACAAGCAAG CAGAACATTA CGTTAATATC CCGCATCATG GGCAGATTGA TAATATTCCG GCAGACTGGG CAGTAGAAAT GACCTGTAAG CTGGGGCGCG ATGGCGCGAC GCCACATCCG CGCATTACGC ATTTCGATGA TAAAGTAATG GGGCTGATTC ACACCATTAA AGGCTTCGAG ATTGCTGCCA GTAACGCCGC ACTTAGCGGA GAATTTAACG ATGTGTTACT GGCGCTAAAC CTTAGTCCGT TGGTGCATTC CGATCGCGAT GCTGAGCTGC TGGCACGCGA GATGATTCTG GCGCACGAGA AATGGCTGCC AAACTTTGCC GACTGCATCG CAGAGCTTAA AAAAGCACAT TAA
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Protein sequence | MSQKLKVVTI GGGSSYTPEL LEGFIKRYHE LPVSELWLVD VEGGKPKLDI IFDLCQRMID NAGVPMKLYK TLDRREALKD ADFVTTQLRV GQLPARELDE RIPLSHGYLG QETNGAGGLF KGLRTIPVIF DIVKDVEELC PNAWVINFTN PAGMVTEAVY RHTGFKRFIG VCNIPIGMKM FIRDVLMLKD SDDLSIDLFG LNHMVFIKDV LINGKSRFAE LLDGVASGQL KASSVKNIFD LPFSEGLIRS LNLLPCSYLL YYFKQKEMLA IEMGEYYKGG ARAQVVQKVE KQLFELYKNP ELKVKPKELE QRGGAYYSDA ACEVINAIYN DKQAEHYVNI PHHGQIDNIP ADWAVEMTCK LGRDGATPHP RITHFDDKVM GLIHTIKGFE IAASNAALSG EFNDVLLALN LSPLVHSDRD AELLAREMIL AHEKWLPNFA DCIAELKKAH
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