Gene EcDH1_1890 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcDH1_1890 
Symbol 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli DH1 
KingdomBacteria 
Replicon accessionCP001637 
Strand
Start bp2042963 
End bp2043670 
Gene Length708 bp 
Protein Length235 aa 
Translation table11 
GC content52% 
IMG OID 
ProductSNARE associated Golgi protein-like protein 
Protein accessionACX39548 
Protein GI260449126 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.028896 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATGATGA TGCAATCGCG AAAAATCTGG TACTACCGTA TAACCCTCAT CATCCTGTTG 
TTCGCTATGC TGCTGGCATG GGCGCTGCTT CCCGGCGTCC ATGAGTTTAT CAATCGCAGC
GTTGCGGCGT TTGCCGCCGT GGACCAACAG GGTATAGAAC GCTTTATTCA GTCTTACGGC
GCACTGGCGG CAGTTGTCTC GTTCTTGTTG ATGATTTTGC AGGCCATTGC TGCACCGCTA
CCTGCGTTTT TGATCACCTT TGCCAATGCG TCGCTGTTTG GCGCGTTCTG GGGCGGCTTG
CTGTCGTGGA CCAGTTCGAT GGCCGGCGCG GCGCTGTGCT TTTTTATCGC CAGAGTGATG
GGCCGCGAAG TGGTGGAAAA ATTAACCGGC AAAACCGTGC TTGACAGTAT GGACGGCTTT
TTCACTCGCT ACGGCAAACA CACCATTCTG GTCTGTCGGT TATTGCCTTT TGTCCCTTTC
GATCCAATCA GCTATGCTGC CGGTTTGACT TCAATACGTT TTCGCTCGTT TTTTATCGCC
ACCGGGCTTG GTCAGTTACC GGCAACTATT GTTTATTCCT GGGCGGGCAG CATGTTAACA
GGCGGTACTT TCTGGTTTGT CACCGGACTG TTTATTCTGT TTGCCCTGAC CGTGGTGATT
TTTATGGCGA AGAAAATATG GCTTGAACGC CAGAAGAGGA ATGCCTGA
 
Protein sequence
MMMMQSRKIW YYRITLIILL FAMLLAWALL PGVHEFINRS VAAFAAVDQQ GIERFIQSYG 
ALAAVVSFLL MILQAIAAPL PAFLITFANA SLFGAFWGGL LSWTSSMAGA ALCFFIARVM
GREVVEKLTG KTVLDSMDGF FTRYGKHTIL VCRLLPFVPF DPISYAAGLT SIRFRSFFIA
TGLGQLPATI VYSWAGSMLT GGTFWFVTGL FILFALTVVI FMAKKIWLER QKRNA