| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcDH1_1829 |
|---|
| Symbol | |
|---|
| ID | 0 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli DH1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | CP001637 |
|---|
| Strand | - |
|---|
| Start bp | 1980182 |
|---|
| End bp | 1981546 |
|---|
| Gene Length | 1365 bp |
|---|
| Protein Length | 454 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | |
|---|
| Product | L-serine dehydratase 1 |
|---|
| Protein accession | ACX39487 |
|---|
| Protein GI | 260449065 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 0.693137 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGATTAGTC TATTCGACAT GTTTAAGGTG GGGATTGGTC CCTCATCTTC CCATACCGTA
GGGCCTATGA AGGCAGGTAA ACAGTTCGTC GATGATCTGG TCGAAAAAGG CTTACTGGAT
AGCGTTACTC GCGTTGCCGT GGACGTTTAT GGTTCACTGT CGCTGACGGG TAAAGGCCAC
CACACCGATA TCGCCATTAT TATGGGTCTT GCAGGTAACG AACCTGCCAC CGTGGATATC
GACAGTATTC CCGGTTTTAT TCGCGACGTA GAAGAGCGCG AACGTCTGCT GCTGGCACAG
GGACGGCATG AAGTGGATTT CCCGCGCGAC AACGGGATGC GTTTTCATAA CGGCAACCTG
CCGCTGCATG AAAACGGTAT GCAAATCCAC GCCTATAACG GCGATGAAGT CGTCTACAGC
AAAACTTATT ATTCCATCGG CGGCGGTTTT ATCGTCGATG AAGAACACTT TGGTCAGGAT
GCTGCCAACG AAGTAAGCGT GCCGTATCCG TTCAAATCTG CCACCGAACT GCTCGCGTAC
TGTAATGAAA CCGGCTATTC GCTGTCTGGT CTCGCTATGC AGAACGAACT GGCGCTGCAC
AGCAAGAAAG AGATCGACGA GTATTTCGCG CATGTCTGGC AAACCATGCA GGCATGTATC
GATCGCGGGA TGAACACCGA AGGTGTACTG CCAGGCCCGC TGCGCGTGCC ACGTCGTGCG
TCTGCCCTGC GCCGGATGCT GGTTTCCAGC GATAAACTGT CTAACGATCC GATGAATGTC
ATTGACTGGG TAAACATGTT TGCGCTGGCA GTTAACGAAG AAAACGCCGC CGGTGGTCGT
GTGGTAACTG CGCCAACCAA CGGTGCCTGC GGTATCGTTC CGGCAGTGCT GGCTTACTAT
GACCACTTTA TTGAATCGGT CAGCCCGGAC ATCTATACCC GTTACTTTAT GGCAGCGGGC
GCGATTGGTG CATTGTATAA AATGAACGCC TCTATTTCCG GTGCGGAAGT TGGTTGCCAG
GGCGAAGTGG GTGTTGCCTG TTCAATGGCT GCTGCGGGTC TTGCAGAACT GCTGGGCGGT
AGCCCGGAAC AGGTTTGCGT GGCGGCGGAA ATTGGCATGG AACACAACCT TGGTTTAACC
TGCGACCCGG TTGCAGGGCA GGTTCAGGTG CCGTGCATTG AGCGTAATGC CATTGCCTCT
GTGAAGGCGA TTAACGCCGC GCGGATGGCT CTGCGCCGCA CCAGTGCACC GCGCGTCTCG
CTGGATAAGG TCATCGAAAC GATGTACGAA ACCGGTAAGG ACATGAACGC CAAATACCGC
GAAACCTCAC GCGGTGGTCT GGCAATCAAA GTCCAGTGTG ACTAA
|
|---|
| Protein sequence | MISLFDMFKV GIGPSSSHTV GPMKAGKQFV DDLVEKGLLD SVTRVAVDVY GSLSLTGKGH
HTDIAIIMGL AGNEPATVDI DSIPGFIRDV EERERLLLAQ GRHEVDFPRD NGMRFHNGNL
PLHENGMQIH AYNGDEVVYS KTYYSIGGGF IVDEEHFGQD AANEVSVPYP FKSATELLAY
CNETGYSLSG LAMQNELALH SKKEIDEYFA HVWQTMQACI DRGMNTEGVL PGPLRVPRRA
SALRRMLVSS DKLSNDPMNV IDWVNMFALA VNEENAAGGR VVTAPTNGAC GIVPAVLAYY
DHFIESVSPD IYTRYFMAAG AIGALYKMNA SISGAEVGCQ GEVGVACSMA AAGLAELLGG
SPEQVCVAAE IGMEHNLGLT CDPVAGQVQV PCIERNAIAS VKAINAARMA LRRTSAPRVS
LDKVIETMYE TGKDMNAKYR ETSRGGLAIK VQCD
|
|---|
| |