Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | EcDH1_1828 |
Symbol | |
ID | 0 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli DH1 |
Kingdom | Bacteria |
Replicon accession | CP001637 |
Strand | - |
Start bp | 1978453 |
End bp | 1980051 |
Gene Length | 1599 bp |
Protein Length | 532 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | |
Product | diguanylate phosphodiesterase |
Protein accession | ACX39486 |
Protein GI | 260449064 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 0.566972 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAAAAAG CACAACGGAT CATTAAAACC TATCGTCGTA ATCGAATGAT TGTTTGTACG ATTTGCGCAC TCGTTACGCT CGCTTCGACC CTGAGCGTGC GATTTATTTC ACAGCGTAAC TTAAATCAAC AACGGGTAGT ACAATTCGCC AATCACGCTG TAGAGGAATT AGATAAAGTA CTGCTTCCCC TACAGGCAGG TAGCGAAGTC TTGCTTCCGC TGATTGGTCT GCCCTGCTCT GTCGCCCATT TGCCATTACG TAAACAGGCG GCAAAACTCC AAACTGTGCG ATCCATTGGC CTGGTGCAAG ACGGCACACT TTATTGCTCC AGCATTTTTG GTTATCGCAA TGTGCCCGTC GTGGACATTC TGGCTGAACT TCCTGCACCG CAACCACTTT TACGCCTGAC GATCGACCGT GCCCTGATTA AAGGCAGTCC GGTTTTGATT CAATGGACGC CTGCAGCGGG CAGTAGCAAT GCTGGGGTCA TGGAGATGAT TAACATCGAC TTACTGACGG CAATGCTGCT TGAGCCACAA CTGCCGCAAA TCAGTAGCGC CAGCCTGACG GTGGACAAAC GGCATTTGCT CTATGGTAAT GGGCTGGTAG ATTCCCTTCC GCAACCTGAA GACAATGAAA ACTATCAGGT TTCTTCGCAA CGCTTTCCTT TTACCATTAA CGTTAATGGT CCGGGGGCTA CGGCGCTGGC ATGGCACTAT CTTCCAACAC AATTACCGCT GGCGGTGCTG CTAAGTTTAC TGGTGGGCTA CATCGCCTGG CTGGCGACCG CTTACCGAAT GAGCTTTTCC CGCGAAATCA ATCTGGGCCT GGCGCAACAT GAGTTCGAAT TGTTCTGTCA GCCTTTGCTT AATGCGCGCA GCCAGCAATG TATTGGTGTA GAGATTTTGC TGCGCTGGAA CAATCCGCGT CAGGGCTGGA TTTCACCGGA TGTGTTTATT CCTATCGCGG AAGAACATCA TTTAATTGTG CCACTGACCC GCTATGTGAT GGCAGAAACC ATTCGTCAGC GCCATGTTTT CCCGATGAGT AGTCAGTTTC ATGTTGGCAT TAACGTCGCA CCCAGCCATT TTCGCCGTGG TGTGCTGATA AAAGATCTCA ATCAGTACTG GTTTAGCGCT CACCCGATTC AGCAACTGAT CCTCGAAATC ACCGAACGCG ATGCCTTACT GGATGTTGAT TATCGGATTG CCCGCGAGCT GCATCGTAAA AACGTCAAAC TGGCGATTGA TGACTTCGGC ACCGGCAACA GCTCGTTTTC CTGGCTTGAA ACATTACGTC CTGACGTGCT GAAAATTGAT AAGTCATTTA CCGCAGCTAT AGGTTCTGAC GCGGTTAACT CGACGGTGAC CGATATCATC ATCGCGCTGG GGCAAAGACT GAATATTGAA CTGGTGGCGG AGGGCGTGGA AACGCAAGAA CAGGCGAAGT ATTTGCGCCG TCATGGCGTG CATATTTTGC AAGGGTATTT GTACGCACAG CCGATGCCGC TACGTGATTT TCCCAAATGG CTGGCGGGCA GCCAACCGCC GCCCGCCCGG CATAATGGAC ATATCACGCC CATTATGCCG TTACGTTAA
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Protein sequence | MQKAQRIIKT YRRNRMIVCT ICALVTLAST LSVRFISQRN LNQQRVVQFA NHAVEELDKV LLPLQAGSEV LLPLIGLPCS VAHLPLRKQA AKLQTVRSIG LVQDGTLYCS SIFGYRNVPV VDILAELPAP QPLLRLTIDR ALIKGSPVLI QWTPAAGSSN AGVMEMINID LLTAMLLEPQ LPQISSASLT VDKRHLLYGN GLVDSLPQPE DNENYQVSSQ RFPFTINVNG PGATALAWHY LPTQLPLAVL LSLLVGYIAW LATAYRMSFS REINLGLAQH EFELFCQPLL NARSQQCIGV EILLRWNNPR QGWISPDVFI PIAEEHHLIV PLTRYVMAET IRQRHVFPMS SQFHVGINVA PSHFRRGVLI KDLNQYWFSA HPIQQLILEI TERDALLDVD YRIARELHRK NVKLAIDDFG TGNSSFSWLE TLRPDVLKID KSFTAAIGSD AVNSTVTDII IALGQRLNIE LVAEGVETQE QAKYLRRHGV HILQGYLYAQ PMPLRDFPKW LAGSQPPPAR HNGHITPIMP LR
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