Gene EcDH1_1730 details

Gene Information

• Locus tag: EcDH1_1730
• ID: 0
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Escherichia coli DH1
• Kingdom: Bacteria
• Replicon accession: CP001637
• Strand: +
• Start bp: 1881223
• End bp: 1881945
• Gene Length: 723 bp
• Protein Length: 240 aa
• Translation table: 11
• GC content: 47%
• Product: transcriptional regulator, LuxR family
• Protein accession: ACX39389
• Protein GI: 260448967

Plasmid Coverage information

• Num covering plasmid clones: 10
• Plasmid unclonability p-value: 0.000000557622
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCAGGATA AGGATTTTTT CAGCTGGCGT CGCACGATGC TGTTGCGTTT TCAGAGGATG 
GAGACCGCAG AAGAGGTCTA CCATGAAATT GAGCTTCAGG CTCAGCAGCT GGAGTACGAT 
TACTATTCGT TATGTGTCCG CCACCCGGTA CCATTCACTC GACCTAAAGT GGCTTTTTAC 
ACCAATTACC CTGAGGCGTG GGTTAGTTAT TATCAGGCAA AAAACTTTCT CGCAATTGAT 
CCGGTGCTGA ACCCTGAAAA CTTTAGTCAG GGCCATTTAA TGTGGAATGA TGACTTATTC 
AGCGAAGCAC AGCCGTTATG GGAAGCCGCG CGCGCACATG GTTTACGCCG CGGTGTCACT 
CAGTATTTAA TGCTGCCAAA CCGGGCGCTG GGCTTTTTGT CCTTTTCCCG TTGCAGCGCG 
CGCGAAATAC CCATTCTTAG TGATGAACTG CAATTAAAAA TGCAGTTACT GGTGCGCGAA 
AGTCTGATGG CTCTGATGCG TTTAAATGAT GAAATAGTGA TGACGCCAGA GATGAATTTC 
AGCAAGCGCG AAAAAGAAAT TCTGAGGTGG ACGGCGGAAG GGAAAACATC AGCAGAGATA 
GCGATGATTT TGTCAATCTC TGAGAATACG GTCAATTTCC ACCAGAAAAA CATGCAGAAA 
AAAATTAATG CACCAAATAA GACCCAGGTT GCCTGTTACG CGGCCGCTAC TGGCTTAATT 
TGA 

 

Protein sequence

MQDKDFFSWR RTMLLRFQRM ETAEEVYHEI ELQAQQLEYD YYSLCVRHPV PFTRPKVAFY 
TNYPEAWVSY YQAKNFLAID PVLNPENFSQ GHLMWNDDLF SEAQPLWEAA RAHGLRRGVT 
QYLMLPNRAL GFLSFSRCSA REIPILSDEL QLKMQLLVRE SLMALMRLND EIVMTPEMNF 
SKREKEILRW TAEGKTSAEI AMILSISENT VNFHQKNMQK KINAPNKTQV ACYAAATGLI