Gene EcDH1_1723 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcDH1_1723 
Symbol 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli DH1 
KingdomBacteria 
Replicon accessionCP001637 
Strand
Start bp1874449 
End bp1875945 
Gene Length1497 bp 
Protein Length498 aa 
Translation table11 
GC content47% 
IMG OID 
Productflagellin domain protein 
Protein accessionACX39382 
Protein GI260448960 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value0.774515 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCACAAG TCATTAATAC CAACAGCCTC TCGCTGATCA CTCAAAATAA TATCAACAAG 
AACCAGTCTG CGCTGTCGAG TTCTATCGAG CGTCTGTCTT CTGGCTTGCG TATTAACAGC
GCGAAGGATG ACGCAGCGGG TCAGGCGATT GCTAACCGTT TCACCTCTAA CATTAAAGGC
CTGACTCAGG CGGCCCGTAA CGCCAACGAC GGTATCTCCG TTGCGCAGAC CACCGAAGGC
GCGCTGTCCG AAATCAACAA CAACTTACAG CGTGTGCGTG AACTGACGGT ACAGGCCACT
ACCGGTACTA ACTCTGAGTC TGATCTGTCT TCTATCCAGG ACGAAATTAA ATCCCGTCTG
GATGAAATTG ACCGCGTATC TGGTCAGACC CAGTTCAACG GCGTGAACGT GCTGGCAAAA
AATGGCTCCA TGAAAATCCA GGTTGGCGCA AATGATAACC AGACTATCAC TATCGATCTG
AAGCAGATTG ATGCTAAAAC TCTTGGCCTT GATGGTTTTA GCGTTAAAAA TAACGATACA
GTTACCACTA GTGCTCCAGT AACTGCTTTT GGTGCTACCA CCACAAACAA TATTAAACTT
ACTGGAATTA CCCTTTCTAC GGAAGCAGCC ACTGATACTG GCGGAACTAA CCCAGCTTCA
ATTGAGGGTG TTTATACTGA TAATGGTAAT GATTACTATG CGAAAATCAC CGGTGGTGAT
AACGATGGGA AGTATTACGC AGTAACAGTT GCTAATGATG GTACAGTGAC AATGGCGACT
GGAGCAACGG CAAATGCAAC TGTAACTGAT GCAAATACTA CTAAAGCTAC AACTATCACT
TCAGGCGGTA CACCTGTTCA GATTGATAAT ACTGCAGGTT CCGCAACTGC CAACCTTGGT
GCTGTTAGCT TAGTAAAACT GCAGGATTCC AAGGGTAATG ATACCGATAC ATATGCGCTT
AAAGATACAA ATGGCAATCT TTACGCTGCG GATGTGAATG AAACTACTGG TGCTGTTTCT
GTTAAAACTA TTACCTATAC TGACTCTTCC GGTGCCGCCA GTTCTCCAAC CGCGGTCAAA
CTGGGCGGAG ATGATGGCAA AACAGAAGTG GTCGATATTG ATGGTAAAAC ATACGATTCT
GCCGATTTAA ATGGCGGTAA TCTGCAAACA GGTTTGACTG CTGGTGGTGA GGCTCTGACT
GCTGTTGCAA ATGGTAAAAC CACGGATCCG CTGAAAGCGC TGGACGATGC TATCGCATCT
GTAGACAAAT TCCGTTCTTC CCTCGGTGCG GTGCAAAACC GTCTGGATTC CGCGGTTACC
AACCTGAACA ACACCACTAC CAACCTGTCT GAAGCGCAGT CCCGTATTCA GGACGCCGAC
TATGCGACCG AAGTGTCCAA TATGTCGAAA GCGCAGATCA TCCAGCAGGC CGGTAACTCC
GTGTTGGCAA AAGCTAACCA GGTACCGCAG CAGGTTCTGT CTCTGCTGCA GGGTTAA
 
Protein sequence
MAQVINTNSL SLITQNNINK NQSALSSSIE RLSSGLRINS AKDDAAGQAI ANRFTSNIKG 
LTQAARNAND GISVAQTTEG ALSEINNNLQ RVRELTVQAT TGTNSESDLS SIQDEIKSRL
DEIDRVSGQT QFNGVNVLAK NGSMKIQVGA NDNQTITIDL KQIDAKTLGL DGFSVKNNDT
VTTSAPVTAF GATTTNNIKL TGITLSTEAA TDTGGTNPAS IEGVYTDNGN DYYAKITGGD
NDGKYYAVTV ANDGTVTMAT GATANATVTD ANTTKATTIT SGGTPVQIDN TAGSATANLG
AVSLVKLQDS KGNDTDTYAL KDTNGNLYAA DVNETTGAVS VKTITYTDSS GAASSPTAVK
LGGDDGKTEV VDIDGKTYDS ADLNGGNLQT GLTAGGEALT AVANGKTTDP LKALDDAIAS
VDKFRSSLGA VQNRLDSAVT NLNNTTTNLS EAQSRIQDAD YATEVSNMSK AQIIQQAGNS
VLAKANQVPQ QVLSLLQG