| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcDH1_1668 |
|---|
| Symbol | |
|---|
| ID | 0 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli DH1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | CP001637 |
|---|
| Strand | + |
|---|
| Start bp | 1817141 |
|---|
| End bp | 1818091 |
|---|
| Gene Length | 951 bp |
|---|
| Protein Length | 316 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | |
|---|
| Product | transcriptional regulator, LysR family |
|---|
| Protein accession | ACX39331 |
|---|
| Protein GI | 260448909 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 0.0000000000112362 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAATTTCC AACAACTAAA GATAATCCGC GAGGCTGCAC GTCAGGATTA CAACCTGACA
GAGGTTGCGA ATATGCTTTT TACCTCACAG TCAGGCGTCA GCCGTCATAT TCGGGAACTG
GAGGATGAAC TTGGCATCGA AATATTTGTT CGACGAGGTA AGCGACTGCT GGGCATGACT
GAACCGGGCA AAGCATTACT GGTCATTGCA GAACGTATTC TGAATGAAGC CAGTAATGTT
CGTCGGCTTG CAGACCTGTT TACCAACGAT ACGTCTGGCG TTCTCACTAT TGCAACGACG
CATACTCAGG CACGTTATAG CTTGCCAGAG GTCATTAAAG CTTTTCGCGA ACTTTTCCCG
GAGGTTCGGC TCGAGCTAAT CCAGGGGACG CCACAGGAAA TTGCGACATT GTTGCAAAAT
GGCGAAGCTG ATATTGGTAT CGCCAGCGAG CGTTTGAGTA ATGACCCGCA GCTCGTCGCC
TTCCCGTGGT TTCGTTGGCA CCATAGTTTG CTTGTTCCAC ACGATCATCC CTTGACGCAA
ATTTCACCAT TGACGCTGGA ATCAATAGCG AAGTGGCCGT TAATCACTTA CCGACAGGGG
ATTACGGGGC GCTCACGTAT TGATGACGCA TTTGCCCGCA AAGGTTTGCT GGCAGATATT
GTATTAAGTG CGCAGGATTC TGATGTCATT AAAACCTATG TTGCTCTTGG GCTTGGGATC
GGATTAGTTG CCGAGCAATC CAGTGGCGAA CAAGAGGAAG AGAATTTAAT CCGCCTGGAT
ACGCGGCATC TTTTTGATGC TAATACTGTC TGGTTGGGAC TGAAGCGAGG ACAACTTCAG
CGTAACTATG TCTGGCGCTT TCTGGAACTT TGTAATGCAG GACTGTCAGT TGAGGATATC
AAGCGGCAGG TGATGGAAAG CAGTGAAGAG GAAATTGATT ATCAGATATA G
|
|---|
| Protein sequence | MNFQQLKIIR EAARQDYNLT EVANMLFTSQ SGVSRHIREL EDELGIEIFV RRGKRLLGMT
EPGKALLVIA ERILNEASNV RRLADLFTND TSGVLTIATT HTQARYSLPE VIKAFRELFP
EVRLELIQGT PQEIATLLQN GEADIGIASE RLSNDPQLVA FPWFRWHHSL LVPHDHPLTQ
ISPLTLESIA KWPLITYRQG ITGRSRIDDA FARKGLLADI VLSAQDSDVI KTYVALGLGI
GLVAEQSSGE QEEENLIRLD TRHLFDANTV WLGLKRGQLQ RNYVWRFLEL CNAGLSVEDI
KRQVMESSEE EIDYQI
|
|---|
| |