Gene EcDH1_1597 details

Gene Information

• Locus tag: EcDH1_1597
• ID: 0
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Escherichia coli DH1
• Kingdom: Bacteria
• Replicon accession: CP001637
• Strand: +
• Start bp: 1742404
• End bp: 1744566
• Gene Length: 2163 bp
• Protein Length: 720 aa
• Translation table: 11
• GC content: 53%
• Product: capsular exopolysaccharide family
• Protein accession: ACX39262
• Protein GI: 260448840

Plasmid Coverage information

• Num covering plasmid clones: 25
• Plasmid unclonability p-value: 0.818894
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACAGAAA AAGTAAAACA ACATGCCGCT CCGGTAACGG GCAGTGATGA AATCGATATT 
GGTCGCCTGG TCGGCACCGT CATTGAAGCG CGCTGGTGGG TGATTGGCAT CACCACCGTA 
TTCGCCCTCT GTGCCGTGGT TTACACCTTC TTCGCCACGC CGATTTATAG TGCCGACGCA 
CTGGTACAAA TCGAGCAAAA CAGCGGCAAT TCGTTAGTGC AGGACATTGG TTCGGCATTA 
GCCAACAAAC CGCCTGCATC GGACGCCGAG ATCCAGTTGA TTCGTTCGCG TCTGGTGCTT 
GGTAAAACGG TGGACGATCT CGACCTCGAT ATTGCAGTGA GCAAAAACAC GTTCCCGATT 
TTCGGTGCGG GCTGGGATCG CCTGATGGGA CGTCAGAACG AGACGGTGAA AGTGACCACC 
TTTAACCGCC CGAAAGAGAT GGCGGATCAG GTGTTTACGC TTAATGTGCT GGACAACAAA 
AACTACACCC TGAGCAGCGA CGGCGGCTTT AGCGCCCGGG GGCAAGCGGG CCAGATGCTG 
AAAAAAGAAG GCGTCACGCT GATGGTTGAA GCCATTCACG CCAGCCCGGG CAGTGAGTTT 
ACCGTCACCA AATACTCCAC GCTGGGGATG ATCAACCAAC TGCAAAACAG CCTGACGGTA 
ACGGAGAACG GCAAAGACGC TGGCGTTTTG AGCCTGACTT ATACCGGTGA AGATCGTGAA 
CAGATCCGCG ACATTCTTAA CAGCATCGCC CGTAACTATC AGGAACAAAA TATTGAGCGC 
AAATCGGCGG AAGCGTCGAA AAGCCTCGCC TTCCTCGCGC AACAGTTACC GGAAGTACGT 
AGCCGCTTGG ATGTTGCCGA AAACAAACTG AATGCCTTCC GTCAGGATAA AGATTCTGTT 
GATCTGCCGC TGGAAGCAAA AGCGGTGCTC GATTCGATGG TGAACATCGA TGCGCAGTTG 
AACGAACTGA CCTTTAAAGA GGCGGAAATC TCCAAGCTGT ACACCAAAGT TCACCCGGCG 
TACCGCACGC TGCTGGAGAA ACGTCAGGCG CTGGAAGACG AAAAAGCCAA ACTTAACGGT 
CGCGTAACGG CGATGCCGAA AACCCAGCAG GAGATTGTCC GTCTGACCCG CGATGTCGAG 
TCTGGTCAGC AGGTTTATAT GCAACTGCTG AATAAAGAGC AGGAGCTGAA AATCACCGAG 
GCCAGCACCG TCGGCGATGT GCGCATTGTT GACCCGGCAA TCACTCAGCC TGGCGTGCTG 
AAACCGAAGA AAGGGCTGAT TATCCTCGGC GCGATTATCC TTGGCCTGAT GCTTTCTATC 
GTGGGTGTGC TGCTGCGCTC GTTGTTTAAT CGCGGCATTG AAAGCCCGCA AGTACTGGAA 
GAACACGGTA TTAGCGTCTA TGCCAGCATC CCGCTGTCGG AATGGCAGAA AGCGCGTGAT 
AGCGTCAAAA CCATCAAAGG GATTAAACGC TATAAACAGA GCCAGCTACT GGCGGTGGGG 
AATCCAACCG ATCTGGCGAT TGAAGCCATC CGTAGTCTGC GTACCAGTTT GCACTTCGCG 
ATGATGCAGG CACAGAACAA TGTGTTGATG ATGACCGGGG TTAGCCCGTC AATTGGTAAA 
ACCTTTGTCT GCGCCAACCT GGCGGCGGTG ATCAGCCAGA CCAATAAACG CGTGTTGTTG 
ATCGACTGCG ATATGCGCAA AGGCTACACC CACGAGCTGT TGGGCACTAA TAACGTTAAT 
GGCCTGTCGG AAATTCTGAT TGGTCAGGGC GATATTACTA CCGCTGCTAA ACCGACCTCT 
ATTGCCAAAT TTGACCTGAT CCCGCGCGGT CAGGTGCCGC CAAATCCTTC TGAACTGTTG 
ATGAGCGAAC GCTTTGCCGA ACTGGTGAAC TGGGCGAGTA AAAACTATGA CCTGGTGTTG 
ATTGATACGC CGCCGATTCT GGCAGTGACC GATGCGGCAA TTGTTGGTCG TCATGTCGGA 
ACCACGTTAA TGGTGGCGCG TTATGCGGTC AACACATTGA AAGAAGTGGA AACCAGTCTG 
AGCCGCTTTG AGCAAAACGG TATTCCGGTG AAAGGGGTGA TTCTGAACTC CATCTTCCGC 
CGCGCCAGCG CGTATCAGGA TTATGGCTAT TACGAATACG AATATAAGTC GGATGCGAAA 
TAA 

 

Protein sequence

MTEKVKQHAA PVTGSDEIDI GRLVGTVIEA RWWVIGITTV FALCAVVYTF FATPIYSADA 
LVQIEQNSGN SLVQDIGSAL ANKPPASDAE IQLIRSRLVL GKTVDDLDLD IAVSKNTFPI 
FGAGWDRLMG RQNETVKVTT FNRPKEMADQ VFTLNVLDNK NYTLSSDGGF SARGQAGQML 
KKEGVTLMVE AIHASPGSEF TVTKYSTLGM INQLQNSLTV TENGKDAGVL SLTYTGEDRE 
QIRDILNSIA RNYQEQNIER KSAEASKSLA FLAQQLPEVR SRLDVAENKL NAFRQDKDSV 
DLPLEAKAVL DSMVNIDAQL NELTFKEAEI SKLYTKVHPA YRTLLEKRQA LEDEKAKLNG 
RVTAMPKTQQ EIVRLTRDVE SGQQVYMQLL NKEQELKITE ASTVGDVRIV DPAITQPGVL 
KPKKGLIILG AIILGLMLSI VGVLLRSLFN RGIESPQVLE EHGISVYASI PLSEWQKARD 
SVKTIKGIKR YKQSQLLAVG NPTDLAIEAI RSLRTSLHFA MMQAQNNVLM MTGVSPSIGK 
TFVCANLAAV ISQTNKRVLL IDCDMRKGYT HELLGTNNVN GLSEILIGQG DITTAAKPTS 
IAKFDLIPRG QVPPNPSELL MSERFAELVN WASKNYDLVL IDTPPILAVT DAAIVGRHVG 
TTLMVARYAV NTLKEVETSL SRFEQNGIPV KGVILNSIFR RASAYQDYGY YEYEYKSDAK