Gene EcDH1_1561 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcDH1_1561 
Symbol 
ID
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli DH1 
KingdomBacteria 
Replicon accessionCP001637 
Strand
Start bp1699655 
End bp1700509 
Gene Length855 bp 
Protein Length284 aa 
Translation table11 
GC content53% 
IMG OID 
Productclass II aldolase, tagatose bisphosphate family 
Protein accessionACX39229 
Protein GI260448807 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.00268792 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTACGTGG TATCGACAAA GCAGATGCTG AACAACGCAC AGCGCGGCGG TTATGCGGTT 
CCGGCATTCA ATATTCACAA TCTCGAAACG ATGCAAGTGG TGGTAGAAAC CGCTGCCAAC
CTGCATGCGC CGGTCATCAT CGCCGGAACG CCTGGCACAT TTACTCATGC TGGTACAGAA
AATCTGTTGG CGCTGGTCAG CGCGATGGCG AAGCAATATC ACCATCCACT GGCAATTCAT
CTCGACCATC ACACGAAATT TGACGATATC GCTCAGAAGG TTCGTTCTGG CGTGCGCTCA
GTCATGATTG ACGCCTCGCA TTTGCCTTTT GCGCAAAATA TTTCACGGGT CAAAGAGGTG
GTGGATTTTT GCCATCGCTT TGATGTCAGC GTCGAGGCGG AGCTGGGGCA ACTTGGCGGC
CAGGAAGATG ATGTGCAAGT CAATGAAGCC GATGCGTTGT ACACCAACCC CGCTCAGGCG
CGTGAATTTG CCGAGGCAAC CGGAATTGAT TCCCTGGCGG TCGCCATCGG CACGGCTCAT
GGGATGTATG CCAGCGCACC GGCGCTTGAT TTTTCTAGAC TGGAGAACAT TCGCCAGTGG
GTGAACTTAC CGCTGGTGCT GCATGGCGCG TCAGGGTTAT CGACTAAGGA TATTCAGCAA
ACCATCAAAC TGGGGATATG CAAAATCAAC GTTGCAACGG AGCTGAAAAA TGCCTTCTCG
CAGGCGTTAA AAAATTACCT GACCGAGCAC CCTGAAGCGA CCGATCCCCG GGATTATTTG
CAGTCGGCTA AATCCGCAAT GCGCGATGTG GTGAGCAAAG TGATTGCCGA TTGTGGCTGC
GAGGGCAGGG CATAA
 
Protein sequence
MYVVSTKQML NNAQRGGYAV PAFNIHNLET MQVVVETAAN LHAPVIIAGT PGTFTHAGTE 
NLLALVSAMA KQYHHPLAIH LDHHTKFDDI AQKVRSGVRS VMIDASHLPF AQNISRVKEV
VDFCHRFDVS VEAELGQLGG QEDDVQVNEA DALYTNPAQA REFAEATGID SLAVAIGTAH
GMYASAPALD FSRLENIRQW VNLPLVLHGA SGLSTKDIQQ TIKLGICKIN VATELKNAFS
QALKNYLTEH PEATDPRDYL QSAKSAMRDV VSKVIADCGC EGRA